Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00969 ATGGAAATTTCTGGGGAAAACCGCACCAATGGCAATGATTCCTTGAAGCTATGCAATGGGAGTGTTGGTAACAACAATGACCCACTGAACTGGAACAAGGCTGCGGATTCACTGAAAGGTAGCCACCTAGAGGAGGTGAAGCGCATGGTGGAGGAGTACCGGAAGCCAGTGGTCCGTTTAGGGGGGAAAAGCCTCACCATATCTCAGGTGGCAGCGATTGCCAACCACGATGCCGGTATCAACGTGAAGCTCTCCGAGGAGGCACGCGCAGCCGTCAAGGCCAGCAGTGATTGGGTCATGGACAGCATGGACAATGGAACTGACAGTTATGGAGTCACCACCGGCTTTGGTGCCACCTCACATAGGAGAACCAAGCAGGGAGGAGCACTCCAAAGGGAACTCATAAGATTCCTGAATGCCGGCATCTTTGGCAATGGCACAGAAACTTGCCACACTTTGCCTCACTCAGCCACTAGAGCTGCTATGCTGGTTAGAATTAACACCCTCCTTCAAGGGTATTCAGGCATCAGATTTGAGATCTTGGAAGCAATCACCAAATTTCTGAACCATAACATAACCCCATGCTTGCCTCTGAGGGGAACAATCACTGCATCAGGTGACCTTGTGCCTTTGTCTTATGTGGCTGGCCTATTGATTGGCAGGCCCAACTCCAAGTCTACTGGACCTGATGGAAAAGTGCTGAGTGCTAAAGAGGCATTTGAACTAGCAGGAATTGATGGTGGGTTTTTTGATTTGCAACCCAAAGAAGGTTTGGCATTAGTTAATGGCACTGCAGTAGGGTCTGGGTTGGCTTCCATGGTTCTTTTTGAGGCAAACATATTAGCTGTTCTCTCTGAGATCTTGTCAGCAATTTTTGCTGAAGTTATGCAAGGGAAACCAGAATTTACAGATCACTTGACACATAAATTGAAGCACCACCCTGGTCAAATTGAGGCTGCAGCTATAATGGAACACATTTTGGATGGAAGCTCATATGTTAAGGCTGCAGAGAAGTTGCATGAGATGGATCCTCTTCAGAAGCCTAAACAGGACAGATATGCTCTCAGAACATCTCCTCAATGGCTTGGACCACATATTGAAGTTATAAGGCATGCAACAAAGATGATTGAGAGAGAGATAAACTCTGTTAATGATAACCCATTGATTGACGTGTCAAGGAACAAGGCACTTCATGGTGGGAACTTCCAAGGTACCCCAATTGGCGTTTCCATGGATAACACCCGTTTGGCTATTGCTTCAATTGGGAAACTCATGTTTGCTCAATTCTCCGAGCTTGTGAATGATTTCTACAATAATGGGTTGCCTTCAAATCTGTCTGCAAGCCGCAACCCAAGCCTTGACTATGGCTTCAAAGGAGCAGAAATTGCAATGGCATCTTACTGCTCAGAACTTCAATTCCTTGCTAATCCAGTCACCAACCATGTCCAGAGTGCAGAGCAGCATAACCAGGATGTGAACTCTTTGGGCTTGATCTCCTCAAGAAAAACAGCTGAAGCTGTGGACATTTTGAAGCTCATGTCCTCTACTTTCTTGGTTGCATTATGCCAAGCCATTGACCTGAGGCATTTGGAGGAAAACTTGAAGAGCACTGTGAAGGACATTGTCAGCCAGGTGGCCAAGAGAGTCCTAACAATGGGTGTCAATGGTGAGTTGCATCCATCAAGGTTCTGTGAAAAGGACTTGCTCAAAGTGGTTGACCGCGAGCACGTCTTTGCCTACATTGATGATCCATGCAGTGCAACTTACCCGCTAATGCAGAAGCTGAGACAGGTCCTGGTTGATCATGCAATGGAAAATGGTGAAGCAGAGAAAAACTTAAGCACTTCAATCTTCCAAAAGATTGGGGCTTTTGAGGAAGAGCTCAAGACCCTTTTGCCCAAAGAAGTAGAAAGTGCTAGGATTGCGGTTGAGAATGGAAACCCTACCATTACAAACCAGATTAAGGAATGCAGGTCTTACCCATTATACAAGTTTGTGAGGGAAGAGCTGGGGACAAGTTTGCTAACAGGTGAGAAAGTTAGGTCACCTGGTGAAGAGTTTGATAAGGTGTTCTCAGCAATGTGTGTGGGGAAGTTGATTGATCCAATGTTGGAATGTTTGAAGGAGTGGAATGGTGCTCCTCTACCAATCTCTTAG 2157 0.4627 MEISGENRTNGNDSLKLCNGSVGNNNDPLNWNKAADSLKGSHLEEVKRMVEEYRKPVVRLGGKSLTISQVAAIANHDAGINVKLSEEARAAVKASSDWVMDSMDNGTDSYGVTTGFGATSHRRTKQGGALQRELIRFLNAGIFGNGTETCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSTGPDGKVLSAKEAFELAGIDGGFFDLQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAEKLHEMDPLQKPKQDRYALRTSPQWLGPHIEVIRHATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKSTVKDIVSQVAKRVLTMGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHAMENGEAEKNLSTSIFQKIGAFEEELKTLLPKEVESARIAVENGNPTITNQIKECRSYPLYKFVREELGTSLLTGEKVRSPGEEFDKVFSAMCVGKLIDPMLECLKEWNGAPLPIS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00969 718 FunFam Phenylalanine ammonia-lyase 531 652 - -
Bach1g00969 718 NCBIfam phenylalanine ammonia-lyase 27 708 IPR005922 GO:0005737|GO:0006559|GO:0016841
Bach1g00969 718 FunFam Phenylalanine ammonia-lyase 265 571 - -
Bach1g00969 718 CDD PAL-HAL 63 528 IPR001106 -
Bach1g00969 718 FunFam Phenylalanine ammonia-lyase 18 264 - -
Bach1g00969 718 SUPERFAMILY L-aspartase-like 27 717 IPR008948 GO:0003824
Bach1g00969 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Bach1g00969 718 Coils Coil 717 718 - -
Bach1g00969 718 Gene3D - 18 264 IPR024083 -
Bach1g00969 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Bach1g00969 718 PANTHER HISTIDINE AMMONIA-LYASE 25 717 IPR001106 -
Bach1g00969 718 Gene3D - 531 652 IPR023144 -
Bach1g00969 718 Pfam Aromatic amino acid lyase 65 541 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00969 Bach-Chr1 21701358 21705255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00969 1 717 Monolignol Biosynthesis Gene Families AT2G37040 81.517 0.0 1242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00969 K10775 - rcu:8273543 1258.43