Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00964 ATGATCGGAACCAACTTCATGGACGAGATAGACTGCGGCAACTTTTTCGACCAAATCGACGACCTCCTCGATTTCCCCGCCGAAGACGTTGACGCCGCCTTGCCCATCGCCGGTAACTGTAACTATTTTCCGAGCCTTTGGCCGGCAGATTCCGAGTCGTTGCCTGGCTCCGACTCGGTTTTCTCCGGGAAAAGCACGTCGAACATCGCGACGGACCTATCGGTTCCGTATGAAGACATTGTCCAATTGGAATGGTTATCAAATTTTGTGGAGGATTCCTTCTCTGGGGAAAGCTTGACGATGAAGAAAGCGGAGGCATCAGAACCAGCATCGAAGGAGGTAGCAGCACATGAGCAATTCCGGACATCAAGCCCACTTTCTGTGCTGGATAGCAGCAGCTCCTGCTCTGGGGACAAGACTGCGGCTCGCAGCCCTGAAATTGTTGTCCCTGTGCCTTGTGGACGCGCACGCAGCAAGCGCCCACGCCCTGCCACCTTCAATCCTCGTCCTGCAATGCACCTTATCTCCCCTGCTTCCTCTGTTGGCGAAAACACACAGCCAAATGTGGTTTCTAAGCCATGGTCTTCAGAGTCTGACAATTTTGCCGACTCTCATCCTGTCGTGAAGATCCCAAAGCAAGTCTCGGTGGAGCATAAAAAGAAAAAGAGAATCAAACTCACATTCCCATCTGATACTAATCTCACTTCGCCATCACAAGCGGTTAGGAGATGTATGCATTGTGAGATAACAAAGACACCACAATGGAGAGCAGGACCAATGGGGCCTAAAACCCTTTGCAATGCGTGTGGTGTTCGTTATAAGTCAGGTCGACTCTTCCCCGAATACCGCCCCGCTGCAAGCCCTACTTTTTGTTCATCCTTGCACTCCAATTCCCACAAGAAGGTGCTCGAGATGAGAACCACGGCGGGCAACAAACCTACACTGCCAACAAATTCAATTGATGATGCAGAACTCATTCCAAACACTAACACCAGCCTTACCCTGGAATACATTTGA 1017 0.5074 MIGTNFMDEIDCGNFFDQIDDLLDFPAEDVDAALPIAGNCNYFPSLWPADSESLPGSDSVFSGKSTSNIATDLSVPYEDIVQLEWLSNFVEDSFSGESLTMKKAEASEPASKEVAAHEQFRTSSPLSVLDSSSSCSGDKTAARSPEIVVPVPCGRARSKRPRPATFNPRPAMHLISPASSVGENTQPNVVSKPWSSESDNFADSHPVVKIPKQVSVEHKKKKRIKLTFPSDTNLTSPSQAVRRCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCSSLHSNSHKKVLEMRTTAGNKPTLPTNSIDDAELIPNTNTSLTLEYI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00964 338 CDD ZnF_GATA 243 290 IPR000679 GO:0006355|GO:0043565
Bach1g00964 338 MobiDBLite consensus disorder prediction 117 140 - -
Bach1g00964 338 Gene3D - 238 288 IPR013088 GO:0006355|GO:0008270
Bach1g00964 338 Pfam GATA zinc finger 244 277 IPR000679 GO:0006355|GO:0043565
Bach1g00964 338 MobiDBLite consensus disorder prediction 110 141 - -
Bach1g00964 338 ProSitePatterns GATA-type zinc finger domain. 244 269 IPR000679 GO:0006355|GO:0043565
Bach1g00964 338 MobiDBLite consensus disorder prediction 178 198 - -
Bach1g00964 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 242 301 - -
Bach1g00964 338 MobiDBLite consensus disorder prediction 175 198 - -
Bach1g00964 338 PANTHER GATA TRANSCRIPTION FACTOR 18 315 - -
Bach1g00964 338 SMART GATA_3 238 288 IPR000679 GO:0006355|GO:0043565
Bach1g00964 338 FunFam GATA transcription factor 235 318 - -
Bach1g00964 338 PIRSF Txn_fac_GATA_plant 1 331 IPR016679 GO:0003677|GO:0005634|GO:0045893
Bach1g00964 338 ProSiteProfiles GATA-type zinc finger domain profile. 238 274 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00964 Bach-Chr1 21606899 21608654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00964 19 306 C2C2-Gata Transcription Factor Family AT4G32890 39.041 8.90e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bach1g00964 GATA 5.7e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00964 - - qsa:O6P43_005032 456.832