Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00958 ATGGCTAAGGACGTTGAGGTTGCAGAGCGTGGGTCCTTCTTCGCCAAGGACTACCACGACCCACCTCCGGCACCGCTCATTGATGCTGTGGAGCTCACAAAATGGTCGTTTTATAGGGCTTTGATAGCCGAGTTCATTGCCACCTTGCTCTTCCTTTACATTACCGTGCTCACTGTAATTGGGTACAAAAGCCAGACTGATCCCAACCTAAACAGTGTTGCTTGTGGTGGGGTTGGTATTCTTGGAATTGCATGGGCTTTTGGTGGCATGATCTTCATACTCGTTTACTGCACTGCTGGAATTTCCGGAGGCCACATTAACCCAGCAGTAACATTTGGGCTCTTCTTGGCTCGTAAGGTGTCTCTGATCCGAGCCATCATGTATATGGTGGCTCAATGCTTGGGGGCTATCTGTGGAGTTGGGTTGGTCAAGGCCTTCCAACAATCTTACTACAAAAGGTACGGTGGTGGTGCCAATACACTTGCTGATGGCTACAGCACCAGCGTTGGCTTGGGTGCCGAGATCATTGGAACCTTTGTTTTGGTATACACAGTCTTCTCTGCTACTGATCCCAAGAGGAATGCTAGAGATTCCCATGTCCCGGTTTTGGCTCCACTTCCAATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACCATCCCAGTCACTGGCACTGGCATTAACCCAGCTAGGAGTCTTGGAGCTGCGGTTATCTACAACCAAGACAAAGCCTGGGATGATCATTGGATCTTTTGGGTTGGGCCATTCATTGGGGCAGCCATTGCAGCTTTCTACCACCAATTCATCTTGAGGGCAGGTGCAGTTAAGGCTCTTGGATCATTCAGGAGCAATCCCACTGTTTGA 864 0.4977 MAKDVEVAERGSFFAKDYHDPPPAPLIDAVELTKWSFYRALIAEFIATLLFLYITVLTVIGYKSQTDPNLNSVACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFQQSYYKRYGGGANTLADGYSTSVGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNQDKAWDDHWIFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSNPTV 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00958 287 SUPERFAMILY Aquaporin-like 30 271 IPR023271 -
Bach1g00958 287 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Bach1g00958 287 FunFam Probable aquaporin PIP1-2 24 285 - -
Bach1g00958 287 Pfam Major intrinsic protein 31 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 CDD MIP 39 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 10 276 IPR034294 -
Bach1g00958 287 NCBIfam MIP family channel protein 43 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 Gene3D Glycerol uptake facilitator protein. 24 287 IPR023271 -
Bach1g00958 287 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 PRINTS Major intrinsic protein family signature 173 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 PRINTS Major intrinsic protein family signature 39 58 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach1g00958 287 PRINTS Major intrinsic protein family signature 209 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00958 Bach-Chr1 21407701 21410615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00958 1 287 Major Intrinsic Protein MIP AT3G54820 82.578 2.82e-178 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00958 K09872 - qsa:O6P43_008626 535.413