Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00896 ATGGAAACCTTTGGATCCACCTTCAGTTTCTCTACCTCTGATATCAATGATTACTCGCTACACCAGAAAGAGCATCATGTAAGTACCTTTTCTAATCAAACCACTTTCTCCGATCCTCCGAAATCGTCAAATTTAAGCAAACGAAGGCCGCCGTTAGAAAACATCAGAATCCCTCCCACGGCAGCTGCAGCGGCAGCGGCGTTAACTCTTAGCTCCCAAAATCCTGTGGCAACAACCAGTTACAAGGCGAGTTCTTCAGAGAGTAAAGAGGACAAGCACTACAGAGGGGTCAGAAGACGCCCATGGGGTAAGTTCGCAGCTGAGATTCGTGATCCAAATCGGAAAGGCTCTAGGGTATGGCTAGGAACCTTTGATACAGCCATTGAAGCTGCTAAAGCTTATGATAGAGCTGCTTTCAAGATGAGGGGAAGCAAAGCTATACTAAATTTTCCTCTTGAGGTATGCAATTCTCTAGAATCAAATTCAACGGTAAATATTGGAGAGAAAAGGAGAAGGGAAGATGAGAGTGAGACAGAAGAAAAAAAATTAGGGTTTGCAGAGAACAGTAAGGTATTGAAGAAGGAAGACTATTCACCCAAAGGAGTTTGTGCAATGATTGGTCCGTTAACGCCGTCATGTTGGAAGGGGTTTTGGGACCCAGATGCTAAGGGTACTATCTTTAGTATTCCTCCGTTATCGCCGTTATCTCCCCATCCTTCGTTTGGATGTTCACAACTTACGGTTAATTGA 750 0.4427 METFGSTFSFSTSDINDYSLHQKEHHVSTFSNQTTFSDPPKSSNLSKRRPPLENIRIPPTAAAAAAALTLSSQNPVATTSYKASSSESKEDKHYRGVRRRPWGKFAAEIRDPNRKGSRVWLGTFDTAIEAAKAYDRAAFKMRGSKAILNFPLEVCNSLESNSTVNIGEKRRREDESETEEKKLGFAENSKVLKKEDYSPKGVCAMIGPLTPSCWKGFWDPDAKGTIFSIPPLSPLSPHPSFGCSQLTVN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00896 249 CDD AP2 92 151 IPR001471 GO:0003700|GO:0006355
Bach1g00896 249 MobiDBLite consensus disorder prediction 26 49 - -
Bach1g00896 249 PRINTS Ethylene responsive element binding protein signature 133 153 IPR001471 GO:0003700|GO:0006355
Bach1g00896 249 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Bach1g00896 249 SUPERFAMILY DNA-binding domain 93 153 IPR016177 GO:0003677
Bach1g00896 249 MobiDBLite consensus disorder prediction 26 53 - -
Bach1g00896 249 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Bach1g00896 249 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Bach1g00896 249 PANTHER DNA-BINDING DOMAIN 46 176 IPR044808 GO:0003700|GO:0009873
Bach1g00896 249 MobiDBLite consensus disorder prediction 76 97 - -
Bach1g00896 249 FunFam Ethylene-responsive transcription factor 2 92 153 - -
Bach1g00896 249 Gene3D AP2/ERF domain 92 153 IPR036955 GO:0003700|GO:0006355
Bach1g00896 249 Pfam AP2 domain 93 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00896 Bach-Chr1 16590276 16591025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00896 24 249 AP2-EREBP Transcription Factor Family AT5G51190 46.414 9.64e-57 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach1g00896 AP2 2.5e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00896 K09286 - gmx:100795866 239.58