Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00895 ATGACAACAGCAGAAGATTCCTTAAACGTAGAGGTGATTCGCCAACATCTCCTTGGTGAATTTTCTTCCAGTGATCCCTTTTTTGCCAATCTTTTTCCAGCGAAAATCGAATACCAATCATCAGAATCTGATTTGGACTCATATATTTCAGAACAGAGTCTCTGTTTTACCGCATCCTCCTTTCTTGAGGCAGACATCGAAATCCTTGATTTCAGTTCCCCAAAATTTCTGAAATCCATGGAGAACAATCCGTCGGAGGAAACCCAGGAGCCAAATTCCACCGAATCGGTGGTTTCCGAGCAGAGGAGCTCAGAATATGACGAGGGGAGGCGTTACAGAGGAGTCCGGCGACGGCCTTGGGGCAAGTTCGCCGCGGAGATACGCGACCCGACCCGGAAAGGGACCCGGGTATGGCTGGGTACATTTGACAGTGAGATTGATGCCGCGAAGGCTTATGATTGTGCCGCCTTTAGAATGAGAGGTCAAAAGGCAATACTGAATTTTCCCCTAGAGGCCGGAGGATCAAATCCAAAGCCCAACTGCAGTGGCCGGAAAAGGAGAAGAGAGAGCACAGAGGAGCAACCAGAAATTCATCATGGTATTACGTCATGA 612 0.4837 MTTAEDSLNVEVIRQHLLGEFSSSDPFFANLFPAKIEYQSSESDLDSYISEQSLCFTASSFLEADIEILDFSSPKFLKSMENNPSEETQEPNSTESVVSEQRSSEYDEGRRYRGVRRRPWGKFAAEIRDPTRKGTRVWLGTFDSEIDAAKAYDCAAFRMRGQKAILNFPLEAGGSNPKPNCSGRKRRRESTEEQPEIHHGITS 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00895 203 SMART rav1_2 111 175 IPR001471 GO:0003700|GO:0006355
Bach1g00895 203 MobiDBLite consensus disorder prediction 182 196 - -
Bach1g00895 203 Gene3D AP2/ERF domain 110 171 IPR036955 GO:0003700|GO:0006355
Bach1g00895 203 MobiDBLite consensus disorder prediction 79 100 - -
Bach1g00895 203 MobiDBLite consensus disorder prediction 79 110 - -
Bach1g00895 203 PANTHER DNA-BINDING DOMAIN 79 184 IPR044808 GO:0003700|GO:0009873
Bach1g00895 203 CDD AP2 119 169 IPR001471 GO:0003700|GO:0006355
Bach1g00895 203 ProSiteProfiles AP2/ERF domain profile. 111 169 IPR001471 GO:0003700|GO:0006355
Bach1g00895 203 MobiDBLite consensus disorder prediction 169 203 - -
Bach1g00895 203 Pfam AP2 domain 111 161 IPR001471 GO:0003700|GO:0006355
Bach1g00895 203 SUPERFAMILY DNA-binding domain 111 171 IPR016177 GO:0003677
Bach1g00895 203 PRINTS Ethylene responsive element binding protein signature 112 123 IPR001471 GO:0003700|GO:0006355
Bach1g00895 203 PRINTS Ethylene responsive element binding protein signature 151 171 IPR001471 GO:0003700|GO:0006355
Bach1g00895 203 FunFam Ethylene-responsive transcription factor 2 110 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00895 Bach-Chr1 16547440 16548051 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00895 1 194 AP2-EREBP Transcription Factor Family AT5G07580 40.102 5.78e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach1g00895 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00895 - - ccaj:109813158 232.261