Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00880 ATGAATAACAGCACCATCAACTCCCCCAGTGGTCCCCATGCTTCTGTAGCTGGTGGATTCACCTATGGCATCATACTCACACTTGGTATGCTCTTTTCAGTCTTAATCTTTCTTTTGGCCTGTGCCCGTCTTCGCCTTCATTTGATCATCTTCCATGTTCTGAGTGGACAACAACCAACAAGAACAGCAGCAGTACAAGACTCTGTGGAGAATACCAACAGAGAACAAGGCCTTGATGAAACCATTATTGATAGCTATCCGAAACTCCTCTACTCTCAAGTAAAGAAACGCGATTCCGTTTCATCATGCTGCTCCATTTGCCTGGTAGATTTTACAGAAGCTGATGAACTTCGTATGTTACCAGATTGTGGCCATCTTTATCATCTTAGTTGTATTGATTCTTGGCTTAAGTTGCATGCAACCTGCCCAATATGCCGGAAGTCACCCGTTAGAGTTTCACAGACTAGTATGCCTGCAGAAGAGGTAACTGTCCATGTTGAATAG 504 0.4385 MNNSTINSPSGPHASVAGGFTYGIILTLGMLFSVLIFLLACARLRLHLIIFHVLSGQQPTRTAAVQDSVENTNREQGLDETIIDSYPKLLYSQVKKRDSVSSCCSICLVDFTEADELRMLPDCGHLYHLSCIDSWLKLHATCPICRKSPVRVSQTSMPAEEVTVHVE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00880 167 SMART ring_2 104 145 IPR001841 -
Bach1g00880 167 Pfam Ring finger domain 104 146 IPR001841 -
Bach1g00880 167 SUPERFAMILY RING/U-box 82 150 - -
Bach1g00880 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 150 IPR013083 -
Bach1g00880 167 FunFam E3 ubiquitin-protein ligase ATL6 66 151 - -
Bach1g00880 167 CDD RING-H2_EL5-like 103 146 - -
Bach1g00880 167 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Bach1g00880 167 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 159 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00880 Bach-Chr1 15600281 15600784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00880 18 164 C3H Transcription Factor Family AT2G35910 41.333 1.18e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00880 - - qsa:O6P43_008798 148.673