Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00871 ATGTTTGCAGTTGTAGCTGTTGCGAACGTTCTACAAGCATGGAAAGTTTTAGAAGATCTAACAGCTAATATTGATCTGCTTTTGACTGAGGTGAACCTACCATGTGAAACGGGCATTGGTCTTCTATCCAAGATAATGAATCACAAGTCTCACAAAAATATTCCTGTGATTATGATGTCATCTCATGATTCTATGAGTATAGTATTTAAGTGTTTGTCAAAGGGTGCAGTTGACTTTTTGGTCAAGCCTATACGAAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAAATCCCAGAGCTCTAGTGGTAACGGAAGTGAAAGTGGAGTACGCACTCAAAAGTCTATGAAGTCTGTAAGTACGGAGCATTCAGACAACAAGCATGACAAACATGACGAGGATGATATTGGAAGCAGTGGCTTGAATGCTAGAGAAAGAAGTGACAATGGAAGTGGCACCAAGAGTTCTTGGACAAAGATTGAAGTTGAAGTTGACAGCCCTCGACGGATGTCCCCTTGGGACCAACTGGCTGATCAACCTGGAAGCGCATGTGCCCAAGTTACTCCTTCAATCTCTGAAGCAAACGGCAACAATAGGGTGCGTCTAACAAAGGGTTCTGAGACACAAGTTGATGAACTTGACAAAGAATTGGAGACAGGCGTGCCCAGAACATCAACTTTGCAACCTCAAAGCCAATGGAAAGAAGTGCTCCCCAATTTATCAACCTCCAATCAGCCTAAAATTTTAGAGAAAGAAAAGGTTGATGAAGAGCAAGAGAAAGGACAAGTAGAGCTAAATAATGAGAAACAAAATGGAGAATGCAAAAATCAAGTTGCTGATGCATCAGATGTTATCACCAATAATACTAATCCCATGCTAGAAATGCAAGTTCCAGACAACCCCAATGGTAAAGCCCGTTGTGTGAACGGCAAAAATCCCTATGGCTACAATGAATTGCCTTCATTTGACTTAAGAACAAAGCCTATGAAAGACAAGAATCCCTATGGCTACAATGAAGCACCTTCATTTGACTTCAGTGCAAAGACTTCGAACACTGTAACTTTTCTTGGCAGCAGTGCACCAGACCAAAATATTTTAAGACACTCGGAGAATTCAGCCTTCTCCAGGTACCACTCGGCATCTCATCAAGCTCCAACTGGAAATGTGGGAAGCTGTTCTCCAATTGATAATAGCTCCGAGGTTGCGAAAACTGAATCAATGCAAGGCTTGCAATCTTATTTCAATAAGATGCCTCCAAATCAACGTTCTAATGGAAGCAATAACATCAATGATATGGGCTCCAGCACCATTGATAAGCCAACACAAAAGCCCACAATCAAACATCTTAATCCCTCTTCGGCATTCCAGCCTGTGCAAAATGCATCCCCTCTAAATGTACCTCAAGGTAAGCATACCAAATGTGCTTTTGAAAAACATATATGTACAATACAATCAATCCAAGGATCTTTGAAAAACTTTGATCATATACAAGTGCAACACCACCACCACCACCACCACCACCATCATCATCACATGCACAATATGGTTGCAGAGCAACAAGTCAACTATAATGGTCAATCTGTCCAAAACAAGACTGCTCCATCTCCCCATGATGGTTCATCTAATGTCTTGAGTGCAGCAATAATTAGTGATGCTGGTAATCAGAGTCTAAATGGGAGTGCCTCAGGAAGTAACCATGGAAGCAATTCACAAATTGGGTGTAATGCTACTCTAATTGCTGGAGGATGCAACATGGAAAATGGTGATAGAATAGCTGTGAAAGAGGGGAAAACTATTGGAAGAAATTTTGAGACTACATATGCTACTATCCAGGCTCGTTTCCCTCAAAGAGAGGCTGCATTTCAGAAATTTCGCCAGAAAAGAAAAGAGAGATGCTTTGAGAAGAAGGTTCGCTACCAAAGCAGGAAGAAACTAGCAGAACAAAGGCCACGGGTTCGAGGACAATTTGCACGACAAGCAAAGGATGAGAACAAAGAGAAAGATGCAAGTCAATAG 2022 0.4154 MFAVVAVANVLQAWKVLEDLTANIDLLLTEVNLPCETGIGLLSKIMNHKSHKNIPVIMMSSHDSMSIVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRKSQSSSGNGSESGVRTQKSMKSVSTEHSDNKHDKHDEDDIGSSGLNARERSDNGSGTKSSWTKIEVEVDSPRRMSPWDQLADQPGSACAQVTPSISEANGNNRVRLTKGSETQVDELDKELETGVPRTSTLQPQSQWKEVLPNLSTSNQPKILEKEKVDEEQEKGQVELNNEKQNGECKNQVADASDVITNNTNPMLEMQVPDNPNGKARCVNGKNPYGYNELPSFDLRTKPMKDKNPYGYNEAPSFDFSAKTSNTVTFLGSSAPDQNILRHSENSAFSRYHSASHQAPTGNVGSCSPIDNSSEVAKTESMQGLQSYFNKMPPNQRSNGSNNINDMGSSTIDKPTQKPTIKHLNPSSAFQPVQNASPLNVPQGKHTKCAFEKHICTIQSIQGSLKNFDHIQVQHHHHHHHHHHHHMHNMVAEQQVNYNGQSVQNKTAPSPHDGSSNVLSAAIISDAGNQSLNGSASGSNHGSNSQIGCNATLIAGGCNMENGDRIAVKEGKTIGRNFETTYATIQARFPQREAAFQKFRQKRKERCFEKKVRYQSRKKLAEQRPRVRGQFARQAKDENKEKDASQ 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00871 673 Pfam CCT motif 619 661 IPR010402 GO:0005515
Bach1g00871 673 Pfam Response regulator receiver domain 3 91 IPR001789 GO:0000160
Bach1g00871 673 Gene3D - 1 147 - -
Bach1g00871 673 MobiDBLite consensus disorder prediction 144 162 - -
Bach1g00871 673 MobiDBLite consensus disorder prediction 120 143 - -
Bach1g00871 673 MobiDBLite consensus disorder prediction 100 162 - -
Bach1g00871 673 ProSiteProfiles Response regulatory domain profile. 1 97 IPR001789 GO:0000160
Bach1g00871 673 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 319 IPR045279 GO:0009736
Bach1g00871 673 ProSiteProfiles CCT domain profile. 619 661 IPR010402 GO:0005515
Bach1g00871 673 SUPERFAMILY CheY-like 2 103 IPR011006 -
Bach1g00871 673 MobiDBLite consensus disorder prediction 241 263 - -
Bach1g00871 673 MobiDBLite consensus disorder prediction 415 444 - -
Bach1g00871 673 MobiDBLite consensus disorder prediction 100 119 - -
Bach1g00871 673 MobiDBLite consensus disorder prediction 646 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00871 Bach-Chr1 15341269 15356910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00871 26 670 Response Regulator Gene Family AT5G02810 35.977 5.10e-70 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Bach1g00871 Response_reg 8.9e-16 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00871 K12129 - zju:107413622 613.224