Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00855 ATGGAGCAGCTAGAAGAGCATGAAGTGTACGGAGGAGAAATTCCCGATGAGGGGGAGATGGACGCAGACTTGGAGATGTCTGCTAGGATTGAAGATGGAGAAGACGACCCTGACGGCCCCAATAACCGGAACAAGGACTTGGAGGACATGAAGAAGAGGCTCAAGGAGATTGAAGAAGAAGCTTCTGCACTTCGCGAAGTGCAGGCCAAGGTTGAGAAAGAGATGGGTATTGTTCAAGATTCAACAGGTTCTTCTGCTAGTCAAGCTGAAAAGGAGGAAGTGGATTCTCGATCAATTTATGTTGGAAATGTTGACTATGCAAGTACACCCGAGGAAGTCCAACAGCATTTTCAGTCATGTGGAACTGTGAACAGAGTGACGATATTGACAGACAAGTTTGGTCAACCTAAAGGATTTGCTTATGTCGAGTTTGTTGAGGTTGATGCTGTTCAGAATGCTCTTCTGTTGAATGAATCAGAACTGCACGGTCGACAATTGAAGGTCTCCGCTAAACGTACAAATGTTCCTGGAATGAAGCAGTATCGTGGAAGAAGACCTATTGGTTCTAGAAGGCCTTTCATGCCTTCTCCGTTCTATCCTCCATTTGCTTATGGAAGGTTTCCAAGGTTTAGGCGACCTACACGGTACAGGCCATACTAG 660 0.4591 MEQLEEHEVYGGEIPDEGEMDADLEMSARIEDGEDDPDGPNNRNKDLEDMKKRLKEIEEEASALREVQAKVEKEMGIVQDSTGSSASQAEKEEVDSRSIYVGNVDYASTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVDAVQNALLLNESELHGRQLKVSAKRTNVPGMKQYRGRRPIGSRRPFMPSPFYPPFAYGRFPRFRRPTRYRPY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00855 219 SMART rrm1_1 98 169 IPR000504 GO:0003723
Bach1g00855 219 CDD RRM_II_PABPs 98 169 - -
Bach1g00855 219 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 8 190 - -
Bach1g00855 219 Gene3D - 40 170 IPR012677 -
Bach1g00855 219 MobiDBLite consensus disorder prediction 1 54 - -
Bach1g00855 219 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 167 IPR000504 GO:0003723
Bach1g00855 219 SUPERFAMILY RNA-binding domain, RBD 87 192 IPR035979 GO:0003676
Bach1g00855 219 Coils Coil 44 74 - -
Bach1g00855 219 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 97 173 IPR000504 GO:0003723
Bach1g00855 219 MobiDBLite consensus disorder prediction 22 54 - -
Bach1g00855 219 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00855 Bach-Chr1 14966501 14973117 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00855 98 169 Eukaryotic Initiation Factors Gene Family AT2G36660 36.842 8.70e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00855 K14396 - qsa:O6P43_008768 355.525