Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00842 ATGAGAAGAACAAGAGGGAAGCAACAGCGTGGTGTTCAAGTGGACGTGGAGGAGGCATGGACTATCAAGCCACTCAATCAGGACCACTGCCATGGATCCTTCGAGTCTTCTTTTTCCCCTTCTGGCTCAGCTTCTCGCTCCCAAGGTGCTGGACCATCTACCAGCAAGACCCACCAAAATTTTATTCCCCGAAACCAAACAACTCATCAAAATGCAAATCCCAATTCGAGGAAACAACGTGGAGAGGTGAAATTCCAGTTTGTCAAGAAATCTGAGGCGGCTCGTTTACCTGAAGAAGTTGGTTCCTTGAGCATTAATGACGAAGTTGATGTGCCACGAGGAAAGACCGAGGAGAACAAGGGTGGTTCAGAGTTGAAGATTGAGGTGAGAGACGAGATTCAAGAGAGAGATGAGGATCATATTCAAAGTAGGCTTGATGAGTTACTGAAAATGGCTTTGGAAGAGCTAGAATTATCGGAGGAGCATCTGAGTATCAATGATCAATTGCAGGAAAATGAGCTACTTGTGATGGAGTCAATATATGGAGAAAATATTTTCAACCTTGATAGAAAGAGAGGCCTACGTTGTTTTCAGATACACGTACATATTGAAGTTCCAGGTGAGATTTTGGTTACCGCAAAACTAAACTCTCCTAATGAAGTTGAGAGCAAACAGAGCAAGTCAGATGACTTCATATACTCCTTCAACGTCCAATATCTTCCACCTCTTGTTTTGACATGTTTATTACCTAAGACATACCCAAGCCACCAGCCACCTATCTTTACAATCTCTGTTCAGTGGTTGGATTCCATGAGTATTTCCAGTCTATGCTCCAAGTTGGATTCAATATGGACAGAGCAGCAGGGCCAAGAAGTCTTATACCAGTGGGTAGAATGGCTGCAAGGATCTTCTCTTTCTTATCTGGGATTTGATAAGGAAATAAAACTTGGTCCTTATGGCATGAAACATGCTGGTGACAAGCGTGCTCTTTCTGGAGTTGTTTCTCCTGGTGTGGATATACCTTTGATACGAAGTTATAATGATGAGAGGCACCATAAGAACTTCTGCAAGGAATTGCATAAATGTTGCATTTGCTTTAATGAGTATCCGGGCACTGAATTTGTCAGATTGCCATGTATGCATTTCTTTTGCTGGAAATGCTTGCAGATGTATACGGACATTCATGTAAAAGAAGGCACAGTCAATACTCTTCAATGTCTTGAAGCAAAATGTGCAGTTATGATTCCACCTGGTATCTTAAAACGATTACTTAGTGATGAAGAGTATGAACGCTGGGAATCCTTGATGTTGGAAAAAACGCTTGCGACAATGCCTGATGTTGCTTATTGCCCAAGATGTCAAACACCGTGCATAGAGGATGACGACCAACATGCACAATGCTCAAAATGCTATTTTAGCTTTTGTACACTTTGCAGGGAGCGACGCCATGTGGGCATAGCATGTATGACACCAGAAACGAAGCTTCTTATTTTGCAAGAGCGCCAGAAATCATCTCAATTAAAGGAAGATCAGAAGCATAAAGAACGTGAAATGATCAATGACATTCTCAGTATGAAAGAAATCAATCGTGATGCTAAGCAGTGCCCATCTTGTAAGATGGCAATTTCTCGAACTGAAGGTTGCAACAAAATGGAGTGTTATAATTGTGGCCAATATTTCTGTTACAGATGCAACAAAGCAATTAGCGGATATGAACATTTCAGGGATGGGACATGTGAACTGTTTCCACAAGAAATGATTCAGGTCTGGGAAGAGCGCATAAATCCCCGGCAGGTGTATGCACAGGCTCAGGCTGAACTTTTTGCAGGACATGGCCAGTCATGCCCTAATTGTCGTCAATTTAATGCAAAGGTTGGAAACAATAATCATATGTTTTGCTGGGCATGCCAAACACACTATTGCTACTTATGCAAGAAGATTGTTAAGCGTAGTGCTGAGCACTATGGACCCAGGGGTTGCAAGCAGCACACTGAGGGGTAG 2001 0.4248 MRRTRGKQQRGVQVDVEEAWTIKPLNQDHCHGSFESSFSPSGSASRSQGAGPSTSKTHQNFIPRNQTTHQNANPNSRKQRGEVKFQFVKKSEAARLPEEVGSLSINDEVDVPRGKTEENKGGSELKIEVRDEIQERDEDHIQSRLDELLKMALEELELSEEHLSINDQLQENELLVMESIYGENIFNLDRKRGLRCFQIHVHIEVPGEILVTAKLNSPNEVESKQSKSDDFIYSFNVQYLPPLVLTCLLPKTYPSHQPPIFTISVQWLDSMSISSLCSKLDSIWTEQQGQEVLYQWVEWLQGSSLSYLGFDKEIKLGPYGMKHAGDKRALSGVVSPGVDIPLIRSYNDERHHKNFCKELHKCCICFNEYPGTEFVRLPCMHFFCWKCLQMYTDIHVKEGTVNTLQCLEAKCAVMIPPGILKRLLSDEEYERWESLMLEKTLATMPDVAYCPRCQTPCIEDDDQHAQCSKCYFSFCTLCRERRHVGIACMTPETKLLILQERQKSSQLKEDQKHKEREMINDILSMKEINRDAKQCPSCKMAISRTEGCNKMECYNCGQYFCYRCNKAISGYEHFRDGTCELFPQEMIQVWEERINPRQVYAQAQAELFAGHGQSCPNCRQFNAKVGNNNHMFCWACQTHYCYLCKKIVKRSAEHYGPRGCKQHTEG 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00842 666 ProSiteProfiles RWD domain profile. 172 307 IPR006575 GO:0005515
Bach1g00842 666 Pfam RWD domain 168 302 IPR006575 GO:0005515
Bach1g00842 666 CDD Rcat_RBR 611 646 - -
Bach1g00842 666 FunFam RBR-type E3 ubiquitin transferase 357 441 - -
Bach1g00842 666 CDD BRcat_RBR_RNF14 441 494 - -
Bach1g00842 666 SMART ring_2 615 644 IPR001841 -
Bach1g00842 666 SMART ring_2 362 409 IPR001841 -
Bach1g00842 666 SMART ring_2 450 538 IPR001841 -
Bach1g00842 666 SUPERFAMILY RING/U-box 606 664 - -
Bach1g00842 666 ProSitePatterns Zinc finger RING-type signature. 379 388 IPR017907 -
Bach1g00842 666 Gene3D - 501 607 - -
Bach1g00842 666 CDD RING-HC_ITT1-like 357 415 - -
Bach1g00842 666 SUPERFAMILY RING/U-box 430 493 - -
Bach1g00842 666 ProSiteProfiles TRIAD supradomain profile. 358 584 IPR044066 -
Bach1g00842 666 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 216 581 IPR031127 GO:0004842|GO:0016567
Bach1g00842 666 SUPERFAMILY RING/U-box 522 574 - -
Bach1g00842 666 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 357 443 IPR013083 -
Bach1g00842 666 SUPERFAMILY RING/U-box 358 441 - -
Bach1g00842 666 ProSiteProfiles Zinc finger RING-type profile. 362 406 IPR001841 -
Bach1g00842 666 Gene3D Ubiquitin Conjugating Enzyme 159 308 IPR016135 -
Bach1g00842 666 MobiDBLite consensus disorder prediction 24 81 - -
Bach1g00842 666 MobiDBLite consensus disorder prediction 30 80 - -
Bach1g00842 666 SMART ibrneu5 430 488 IPR002867 GO:0008270
Bach1g00842 666 SMART ibrneu5 517 579 IPR002867 GO:0008270
Bach1g00842 666 FunFam RBR-type E3 ubiquitin transferase 503 609 - -
Bach1g00842 666 Pfam IBR domain, a half RING-finger domain 526 568 IPR002867 GO:0008270
Bach1g00842 666 Pfam IBR domain, a half RING-finger domain 430 488 IPR002867 GO:0008270
Bach1g00842 666 SUPERFAMILY UBC-like 166 302 IPR016135 -
Bach1g00842 666 SMART RWD2001b 172 307 IPR006575 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00842 357 573 ARIADNE family AT3G27710 25.778 1.02e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00842 K11971 - jre:109019042 876.315