Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00826 ATGGCGTCGCTACCATACGCTGACGTAGATTCGAGTTTGAAGGCAATGGCAGGTCGAGCAGAGGGCTTTGGCCACTCCTCAATCGGAGGCCTTCATGGTCCTCTCTATTTCGTCACCACTCTTGCAGATGATGGTCATGGATCCCTTCGAGAAGGATGTCGTCGACAGGGGCCACTCTGGATTGTTTTTGAAGTTTCGGGTACAATTCAGCTTTCATCATACCTGAGTGTGTCATCTTACAAGACAATAGATGGCAGAGGTCAGAGGATAAAGCTCACAGGGAAGGGTTTAAGGCTGAAAGAATGTGAGCACATAATTATATGCAATCTTGAATTTGAGGGTGGTAGGGGTCATGATGTTGATGGCATTCAAATAAAGCCAAACTCTCGTCACATATGGATAGATCGCTGCAGTCTTCGTGATTATGATGATGGACTTATAGACATTACAAGACAAAGCACAGATATTACTGTATCTAGATGTCATTTTGCACAACATGACAAGACCATGCTAATTGGAGCTGACCCATCTCACATTGGCGATAGATGCATCCGGGTGACAATTCATCATTGCTTCTTTGATGGGACTCGACAAAGACACCCTCGTCTGAGATTTGGAAAGGTTCATCTCTACAATAATTACACCAGAAATTGGGGTGTATATGCTGTTTGTGCTAGTGTTGAGTCCCAGATATACTCTCAGTGCAACATATATGAAGCAGGAAATAAGAAAAAGACTTTTGAATTTTATATAGAAAAGGCCGCAGATGCAGAAGAGCAGAAGTCTGGCTTCATAAGATCTGAAGGAGATATGTTTCTCAATGGAGCTCAACCATGCTTATTGACAGATTACAGAGAAGAATGCATGTTCCATCCCAGTGAATATTACCCAACATGGACAACAGAAGCAGCCTCCCCTTCTCTTAGAGATGTCCTTCAATTATGTACAGGTTGGCAGTCCATCTGTAGGCCAGTAGACCATATGGTTTCTATGTAG 996 0.4327 MASLPYADVDSSLKAMAGRAEGFGHSSIGGLHGPLYFVTTLADDGHGSLREGCRRQGPLWIVFEVSGTIQLSSYLSVSSYKTIDGRGQRIKLTGKGLRLKECEHIIICNLEFEGGRGHDVDGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCHFAQHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRLRFGKVHLYNNYTRNWGVYAVCASVESQIYSQCNIYEAGNKKKTFEFYIEKAADAEEQKSGFIRSEGDMFLNGAQPCLLTDYREECMFHPSEYYPTWTTEAASPSLRDVLQLCTGWQSICRPVDHMVSM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00826 331 PRINTS Pollen allergen Amb family signature 199 218 IPR018082 -
Bach1g00826 331 PRINTS Pollen allergen Amb family signature 19 36 IPR018082 -
Bach1g00826 331 PRINTS Pollen allergen Amb family signature 221 240 IPR018082 -
Bach1g00826 331 PANTHER PECTATE LYASE 18-RELATED 8 282 IPR045032 GO:0030570
Bach1g00826 331 Pfam Pectate lyase 74 237 IPR002022 -
Bach1g00826 331 Gene3D - 6 309 IPR012334 -
Bach1g00826 331 SMART amb_all 26 244 IPR002022 -
Bach1g00826 331 SUPERFAMILY Pectin lyase-like 17 319 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00826 Bach-Chr1 14367302 14369884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00826 41 329 Polysaccharide Lyase AT3G55140 82.007 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00826 K01728 - gmx:100802068 615.92