Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00824 ATGGCGAGGATCAAGGTTCACGAGCTTAGGCAGAAATCGAAGGCGGAGTTGCTGAGCCAGCTCAACGATCTCAAGGCTGAGCTTGCTTTGCTCCGTGTTGCTAAGGTCACTGGCGGTGCCCCAAACAAGCTCTCAAAGATAAAGGTGGTGAGATTGTCCATTGCCCAAGTGTTGACGGTGATTTCTCAGAAGCAGAAGGCTGCATTGAGGGACGCATATAAGAAGAAGAAGTACTTGCCTCTTGATCTGCGCCCAAAGAAGACAAGGGCTATTCGCAGAAAGCTTACCAAGCACCAGGCATCATTGAAGACTGAAAGAGAGAAGAAGAAGGAGACATACTTTCCAATGAGGAAATATGCTATCAAGGTTTAGGAGAGGGCAATCGTACATGTTTATTGCATATATGATGCATCCTTCATAGTTAACAAAGTTTGAGATATTTCTTCTTTATGGTTTTCTGTTGGTATTTTTGGTTGTATGGTGTTTACATATTCAGACATTGGGCTCTCACTTATTTAAGCCATTAGATTTTTGTTAAGTTTAACCCGTTAAATGGATTTCCCGAGTTTTA 571 0.4256 MARIKVHELRQKSKAELLSQLNDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALRDAYKKKKYLPLDLRPKKTRAIRRKLTKHQASLKTEREKKKETYFPMRKYAIKV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00824 123 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Bach1g00824 123 PANTHER 60S RIBOSOMAL PROTEIN L35 1 123 IPR045059 GO:0000463|GO:0022625
Bach1g00824 123 FunFam 60S ribosomal protein L35 78 123 - -
Bach1g00824 123 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Bach1g00824 123 FunFam 60S ribosomal protein L35 1 77 - -
Bach1g00824 123 NCBIfam 50S ribosomal protein L29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Bach1g00824 123 Gene3D - 78 123 - -
Bach1g00824 123 Coils Coil 14 34 - -
Bach1g00824 123 CDD Ribosomal_L29_HIP 8 64 - -
Bach1g00824 123 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Bach1g00824 123 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00824 Bach-Chr1 14352674 14354221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00824 1 123 Cytoplasmic Ribosomal Protein Gene Family AT2G39390 87.805 7.95e-72 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00824 K02918 - cpap:110824116 224.172