Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach1g00798 | ATGAAGAGAGAAAGAGAGGTTGATAACTTAACCTTGGCCAATTGTCTGATGTTACTTTCTCGCCAAGGAAGCAAATTTGAGGCATCATATTCTGATTCTTCAAATTCCAGCCACCGTGTCTTCGAGTGCAAGACCTGCAACCGGCAGTTCCCGTCGTTTCAAGCCCTCGGCGGCCACCGCGCCAGCCACAAGAAGCCGCGGCTGATGGCCGGAGGAGAAGGATCAGAGCATGATAGCCAATCGCTCAGCCATGGTTCGCCGGCGAAACCTAAAACACACGAGTGCTCCATTTGTGGATTGGAGTTTGCAATAGGACAGGCTCTGGGAGGTCACATGAGGAGGCACAGAGCAGCAGCTTTGAATGAAAACACGCAGACTAGTGCTTCTTTTGCTATGAGTAGTAGCAGTGGTGGTAGTTTTGATTCATCTTCAGCTACCAAGAAGAAAGCTAACACCAAGAGGGTTTTGTTTTTGGATTTGAATTTGACACCATTAGAGAATGATTTGCAGATTTTGAGGATTGGAAAGCTAGCAACTCCTTTGGTGGATTGCTTCTATTGA | 561 | 0.4742 | MKREREVDNLTLANCLMLLSRQGSKFEASYSDSSNSSHRVFECKTCNRQFPSFQALGGHRASHKKPRLMAGGEGSEHDSQSLSHGSPAKPKTHECSICGLEFAIGQALGGHMRRHRAAALNENTQTSASFAMSSSSGGSFDSSSATKKKANTKRVLFLDLNLTPLENDLQILRIGKLATPLVDCFY | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach1g00798 | 186 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 93 | 115 | IPR013087 | - | |
Bach1g00798 | 186 | MobiDBLite | consensus disorder prediction | 57 | 88 | - | - | |
Bach1g00798 | 186 | PANTHER | ZINC FINGER PROTEIN ZAT5 | 6 | 167 | - | - | |
Bach1g00798 | 186 | SUPERFAMILY | beta-beta-alpha zinc fingers | 39 | 115 | IPR036236 | - | |
Bach1g00798 | 186 | SMART | c2h2final6 | 41 | 63 | IPR013087 | - | |
Bach1g00798 | 186 | SMART | c2h2final6 | 93 | 115 | IPR013087 | - | |
Bach1g00798 | 186 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 43 | 63 | IPR013087 | - | |
Bach1g00798 | 186 | Gene3D | Classic Zinc Finger | 38 | 115 | - | - | |
Bach1g00798 | 186 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 41 | 68 | IPR013087 | - | |
Bach1g00798 | 186 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 95 | 115 | IPR013087 | - | |
Bach1g00798 | 186 | Pfam | C2H2-type zinc finger | 93 | 117 | - | - | |
Bach1g00798 | 186 | Pfam | C2H2-type zinc finger | 40 | 66 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach1g00798 | Bach-Chr1 | 13569865 | 13570425 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach1g00798 | 1 | 183 | C2H2 Transcription Factor Family | AT2G37430 | 43.158 | 1.20e-39 | 131 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Bach1g00798 | zf-C2H2_6 | 9.4e-10 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach1g00798 | - | - | gmx:100500371 | 244.202 |