Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00781 GCCATCTTCATGCTCCGCTGCAAAACGCAAACCGTCTCTGCTTTACTCAAAATTTCAGAAAACCACACCAGTCTTCTTCTTCCCAAAACCCTAGCCCGAAGCAACACTTACATTTTCCACCAACAATGGCGAATAACCTGGACATGAGTCTCGACGACATTATCGAAAAAAGCAAGAGATCCTCCGGCAATGGTGTTAACCACCGTGGCAGAAGACGCAATTACCGCAGCCCTGGCCCGGACCGTCGAATCGCCGATCGGAAGCCTTCCATAATGACGCCGTACTGGAACCCGAAGCCAATGCAGCTTATGCAAGCAATGTTTTTGGATGGAGGGTCTGGCGTTGAGGCAGGAACCAAGCTGTATATATCTAACTTGGACTATGGGGTTTCTAACGATGACATTAAGCTGCTTTTCTCTGAGGTTGGTCAGCTGAAAAGACATTCCATTCATTATGACAAAAGTGGAAGATCAAAGGGAACAGCAGAAGTTGTCTTTATAAGGCAGTCTGATGCTATAGCAGCTATCAAGAGATACAACAATATGAGACTTGATGGAAAGCCACTAAAGATTGAGCTTGTTGGAGTGAATGTGGTTAGTCCAATTGTCATGCCTCCTCCTGCAAACGGCATACTGGGAAAACAACAGGGTGACTTCACAAGCGGACATGGAAGAGGTGGAGGTGGTGGGTTCCGCAATAGTCATTGGCGTGGCTATCGTCCAATTGGTCATAGACAAGAGAGGGCCTTTGTTGAAAAAGAAAAAGTGACTGCTAAAGATCTTGATACTGAATTGGAGATGTACCACTTGGCAGCTATGGACATAAACAAAGAGTGA 836 0.4605 MANNLDMSLDDIIEKSKRSSGNGVNHRGRRRNYRSPGPDRRIADRKPSIMTPYWNPKPMQLMQAMFLDGGSGVEAGTKLYISNLDYGVSNDDIKLLFSEVGQLKRHSIHYDKSGRSKGTAEVVFIRQSDAIAAIKRYNNMRLDGKPLKIELVGVNVVSPIVMPPPANGILGKQQGDFTSGHGRGGGGGFRNSHWRGYRPIGHRQERAFVEKEKVTAKDLDTELEMYHLAAMDINKE 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00781 236 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 231 - -
Bach1g00781 236 SMART rrm1_1 78 150 IPR000504 GO:0003723
Bach1g00781 236 MobiDBLite consensus disorder prediction 176 196 - -
Bach1g00781 236 MobiDBLite consensus disorder prediction 1 49 - -
Bach1g00781 236 SUPERFAMILY RNA-binding domain, RBD 20 151 IPR035979 GO:0003676
Bach1g00781 236 CDD RRM_THOC4 77 151 - -
Bach1g00781 236 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 77 154 IPR000504 GO:0003723
Bach1g00781 236 Gene3D - 70 207 IPR012677 -
Bach1g00781 236 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 79 148 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00781 Bach-Chr1 13252150 13259617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00781 68 152 Eukaryotic Initiation Factors Gene Family AT2G23350 35.294 2.84e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00781 K12881 - qsa:O6P43_005698 247.284