Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00713 ATGGATTCCATTCCTTCTGTAGCACACAAAACCCTAACCTTAAACTCCAGTGACCTTTTCCTCACTGCGAACAATTCCTTGTCCCAGCAATCCCTCCAAGCCTCGCCATCGCCACTGTCACTCCATCTTTCCCCCGTTCTATCAAATTTCCCACAGTCGAAGCTGATCCCAAAGACCCGTTTCGTGGTGGATGCATTCCGCCATGCCGGCGATTTCTCTGTCTCCTACTTCCTTTCCCACTTTCATTCTGATCACTACACTGGACTTAACCCCAACTGGACCAATGGCGTTGTCTTTTGCTCACAGACTACTTCCCGGCTTCTTGTTGAAGTACTCAAGGTACCCTCTCAGTTTGTATTTTCTTTACCTCTTTGTAAGCCTGTCGAAATTGATGGATGTGAAGTTACACTGGTTGATGCCAATCATTGCCCTGGTGCGGTGCAATTCTTATTCAAAATTCCGGGTGTTGATGGAAAGTTTGAAAGGTATGTTCACACTGGTGATTTTCGGTTTTCTAAATGGATGACAGCTGAACCTCTACTTGGTGCATTTGTGGGTGCGGATGCTGTGTTTCTGGACACAACCTATTGTCATCCTAAGTTTGTCTTTCCTTCCCAAGAAGAGTCTGTCGATTATATTATTGATGCAGTAGAGAGAATTGAAGGTGAATATGATGGTTCATTGAGAGATGTTTTGTTTCTTGTTGCTACATATGTTATTGGGAAAGAGAGGATTCTTCTTGAGCTTGCAAATCGGTTTAAACGTAAAGTACATGTTGATGCTAGAAAAATGGGGGTTTTGCGGGTTCTTGGGTATGGTGAAAGTGGCCCCTTTACAGAGAATGATTCTGAAACTAATATTCATGTTGTTGGGTGGAATGTGTTGGGCGAGACATGGCCGTACTTTAGGCCAAACTTTGTTAGAATGAAGGGTATTATGGTGGAACGAGGTTACTCTAAGGTTGTAGGCTTTGTTCCAACTGGATGGACTTATGAAGTGAAGCGTAATAGATTTAGTGTGAGGTCTAAGGATTCATTTCAGATCCATCTTGTACCGTATAGTGAGCATTCAAACTATGATGAGCTCAGGGATTATGTAAAATTTTTGAAACCAAAGCGGGTGGTTCCTACTGTGGGTATAGATGTGGAGAAAACAGACAGTAAACACGCTACCAAAATGAAAAAGCATTTTTCTGGGTTAGTTGATGAAACGGCCAACAAGCAAGAATTTTTGAAGGGTTTTCATCGAGGATCTATTGAAGTGGGTTACAAGGTTGAAGAGAATGGTAGTGATTCTCCAAAGGCAGTGCAGAATATGGAGACAGAATCGAAGTCATCTGATGTAGAGGATGATAAAAGTAATAATTCCAATCTTCCTCCAGATTTGTCTTCTCTCAGAGAATCTGGCTCGGACGACCCTACTTTTCTTAATGAAGAAGAAAAAGAGAAAATTGTTAAAGAACTTAGTGAATGGTTGCCTGCATGGGTGACTCGAAGCCAAAAGTTAGATCTGATCAGCAAAGCAGGTACCGATGTTGTTGATGCTGTGTCTTTTTTCTGTGAACATGAGGCTGAGTTTCATGAACAATTACCTTCTCATCAAACTTATGTTCCTACATCCAAGTGCAGCCCATTGAATGACATTGATTCATTCTCACAACCACTCCTCATTTCAAACAATAATATTGCTCATAAAAGTATTGGCATTTCTCCAAGTCAAGACTCTAAGTTACCTAACCTGCGGCATTGTGTATCAAGTAGCATTTCTCCTTCAAAAAGAAAGAGAAGCAGTGTAAGTAAATCAAGCAAGAAAGTAAAACTCAATGCAAAATCTGAATCTAGTGGATCAAAGCAATCCACAATAACCAGTTTCTTTGGTAAAATATTGCCTAGTGGTACTCAATCTGGTAACTCCAGATCTGAGCTTGATCAAAGTCATACTGTTGAAGAACCAGTGACGTCTGATGTTAAAAAATTATACAAGGATGAGATTGATCAGTTTATGCAGATAATAAATGGGGACGAGTCCTTAAAAGAATATGCTGTCACTATAATTGAGAAGACAAAAGGAGATATCAATAAGGCATTGGATATATATTACTCTTGTTCTGCTGATCTTGGCGCAAATGAAAAATCAGTTCAAGCTGAATGCAGCGTGGAGATTCTTTCAGAAGAAAAACGTGTGTTACCTGAATTGAGAGTTATGCCTGATATTTCTGTGCAGAGAGTGTCAAGAGAGAATGTAGATGCTACTCTTGTATCTTTGCCACCTGAAAAATACAACCCTAAAGAGCATGCATGTTGGAGAGATGGGCAGCCTGCTCCATATTTACATCTTGCGCGAACCTTCAATCTGCTGGAGGATGAGAAAGGAAAGAAAAAAGCTACTTCAATGCTGTGCAATATGTTCAGAAGTTTGTTGGCCTCGTCTCCAGCTGATGTACTGCCTGCTGTGTATCTGTGCACAAACAAGCTTGCTGCAGACCATGAAAATATGGAGTTAAATATTGGTGGAAGTTTGGTTAGTGCAGCAATGCAAGAGGCATGTGGGACAAATAGATCAAAAATAAGGGAGATGTACAACAAATTTGGTGATCTGGGTGATGTTGCCCAAGAGTGTCGACAAACACAAAGACTACTTGCTCCACCAACGCCACTTTTAATAAAGGATGTTTTCGCAGCACTTCAAAATATAAGTGTACAAACAGGCAGTGGAAGCACTTCTCGGAAGAAAAGCATTATTGTAAATCTCATGCGTTCTTGCCGTGAGAAGGAATTAAAATTTCTTGTTCGGACTTTGGTCCGGAATCTACGGATTGGAGCAATGATTAGAACTGTTTTACCTGCATTTGCTCAAGCTGTTGTTATGAATTCCTGCCTCCTTATATTGCAGCAAGAAGGAACTGCAGAAAAGCTGAAGGAGAAGCTTCAGGCTCTTTCTACAACAGTTGTTGAAGCATACAACATACTTCCTAGTTTGGATCTTTTAGTCCCATCTGTAATGAAGGATGGCATCAATTTTTCTGCTTCACATCTTTCAATGGTTCCTGGAATACCTATCAAGCCTATGCTTGCAAAGATCACCAATGGCATTACCCAGGCACTGAAGCTTTTTGAAAGGAAAGCATTCACTTGTGAGTATAAGTATGATGGCCAGCGAGCCCAAATCCACAAATTAGAAGATGGATCTATTCGTGTTTTTTCAAGAAATGGAGATGAAACGACATCAAGATTTCCTGATCTTATTGACATTATTAAAGAATCATGCAAGCCTGCTGCAGTAACTTTCATACTGGATGCAGAAATTGTTGGTGTTGATAGGAAGAGCGGATATAGGCTTATGTCTTTCCAGGAACTATCTTCGCGCAGAAGAGGAAGCAAAGACTCTTTAATCACCGTGGATAGCATAAAGGTTTTAATTTTGCGTTGCTCACAAGAAACGTCAGAAGCATGGATGGCTACAGTCTTAGACCTTTACATGAAACTTATCAAGCATAATATAATATTATTATTCTTAAATTATTGTGCTGGAAGTTTTGATTGTTTGTTGGAAAATCTGAAGGATCTCTTCTATGACGAAAAATCTGGCTACTTTGAATATGCAAAGGAAATTACTGTAGAAGCAGAAGATGCATGCCTAACGTCTGAGGGCACATTAACTAAGATAAACAGTTTCCTGGAAGATGCAATCCGCTCATCTTGTGAAGGAATTATGGTAAAATCTTTAGACGTTGCTGGGTATTCTCCATCAAAGCGTGCTGACACATGGTTAAAGGTCAAACGAGATTACGTGGAAGGTTTGAATGATTCTCTTGATTTAGTACCAATTGGTGCTTGGCATGGAAATGGAAGGAAAGCTGGATGGTATAGTCCATTTCTCATGGCATGTTACAATCCTGAAACTGAGGAGTATCAAAGTGTGTGTCGTGTGATGTCTGGGTTCTCCGATTCCTTTTACATAGAGATGAAAGAATTCCTTTCTGGAGACAAAATCTTGCCTAGAAAGCCATCATATTATCGAACAGCTGAGGAGCCTGACATGTGGTTTTCTCCACTAGTTGTTTGGGAAATAAGAGGGGCAGACCTAACAGTGTCCCCCGTTCACCATGCTGCAATTGGGTTGGTGCATCCATCTCGTGGCATCTCAATCAGATTCCCTAGATTTATTTGCACCAGGTCTGATAAAAACCCAGAAGAATGTAGCACGGCTTCTGATATAGCTGATATGTTTCAATCTCAGACTAGGAAGATGGATTTGACTGCGGAAGATTGATTATTTGATTGTTTTCAATATATGATCCGTTTATGATGTTAATGATTTATATGATGCTGTTCAAGTTTCTAAATGTAGAGTGGATAGAAAATTTTACAGTGTTTGAGGAGTTTGGAGGGGAGAGGAAGGATTTTGTTGAAGTACTTCATTTGGTTCACTAAGATAAAAATTCCTTCCCTTCCTCTCCTTCTAGTTAAGGCTTTGTCTTCC 4482 0.4023 MDSIPSVAHKTLTLNSSDLFLTANNSLSQQSLQASPSPLSLHLSPVLSNFPQSKLIPKTRFVVDAFRHAGDFSVSYFLSHFHSDHYTGLNPNWTNGVVFCSQTTSRLLVEVLKVPSQFVFSLPLCKPVEIDGCEVTLVDANHCPGAVQFLFKIPGVDGKFERYVHTGDFRFSKWMTAEPLLGAFVGADAVFLDTTYCHPKFVFPSQEESVDYIIDAVERIEGEYDGSLRDVLFLVATYVIGKERILLELANRFKRKVHVDARKMGVLRVLGYGESGPFTENDSETNIHVVGWNVLGETWPYFRPNFVRMKGIMVERGYSKVVGFVPTGWTYEVKRNRFSVRSKDSFQIHLVPYSEHSNYDELRDYVKFLKPKRVVPTVGIDVEKTDSKHATKMKKHFSGLVDETANKQEFLKGFHRGSIEVGYKVEENGSDSPKAVQNMETESKSSDVEDDKSNNSNLPPDLSSLRESGSDDPTFLNEEEKEKIVKELSEWLPAWVTRSQKLDLISKAGTDVVDAVSFFCEHEAEFHEQLPSHQTYVPTSKCSPLNDIDSFSQPLLISNNNIAHKSIGISPSQDSKLPNLRHCVSSSISPSKRKRSSVSKSSKKVKLNAKSESSGSKQSTITSFFGKILPSGTQSGNSRSELDQSHTVEEPVTSDVKKLYKDEIDQFMQIINGDESLKEYAVTIIEKTKGDINKALDIYYSCSADLGANEKSVQAECSVEILSEEKRVLPELRVMPDISVQRVSRENVDATLVSLPPEKYNPKEHACWRDGQPAPYLHLARTFNLLEDEKGKKKATSMLCNMFRSLLASSPADVLPAVYLCTNKLAADHENMELNIGGSLVSAAMQEACGTNRSKIREMYNKFGDLGDVAQECRQTQRLLAPPTPLLIKDVFAALQNISVQTGSGSTSRKKSIIVNLMRSCREKELKFLVRTLVRNLRIGAMIRTVLPAFAQAVVMNSCLLILQQEGTAEKLKEKLQALSTTVVEAYNILPSLDLLVPSVMKDGINFSASHLSMVPGIPIKPMLAKITNGITQALKLFERKAFTCEYKYDGQRAQIHKLEDGSIRVFSRNGDETTSRFPDLIDIIKESCKPAAVTFILDAEIVGVDRKSGYRLMSFQELSSRRRGSKDSLITVDSIKVLILRCSQETSEAWMATVLDLYMKLIKHNIILLFLNYCAGSFDCLLENLKDLFYDEKSGYFEYAKEITVEAEDACLTSEGTLTKINSFLEDAIRSSCEGIMVKSLDVAGYSPSKRADTWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEYQSVCRVMSGFSDSFYIEMKEFLSGDKILPRKPSYYRTAEEPDMWFSPLVVWEIRGADLTVSPVHHAAIGLVHPSRGISIRFPRFICTRSDKNPEECSTASDIADMFQSQTRKMDLTAED 1423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00713 1423 MobiDBLite consensus disorder prediction 602 617 - -
Bach1g00713 1423 Pfam DNA repair metallo-beta-lactamase 278 379 IPR011084 -
Bach1g00713 1423 FunFam DNA ligase 202 356 - -
Bach1g00713 1423 SUPERFAMILY Metallo-hydrolase/oxidoreductase 76 379 IPR036866 -
Bach1g00713 1423 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 289 1134 - -
Bach1g00713 1423 Pfam ATP dependent DNA ligase C terminal region 1286 1395 IPR012309 GO:0003910|GO:0006281|GO:0006310
Bach1g00713 1423 ProSiteProfiles ATP-dependent DNA ligase family profile. 1175 1298 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bach1g00713 1423 CDD SNM1A-1C-like_MBL-fold 51 199 - -
Bach1g00713 1423 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 1046 1054 IPR016059 GO:0003909
Bach1g00713 1423 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 978 1262 - -
Bach1g00713 1423 CDD OBF_DNA_ligase_I 1269 1412 - -
Bach1g00713 1423 Pfam DNA ligase N terminus 775 951 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach1g00713 1423 MobiDBLite consensus disorder prediction 569 617 - -
Bach1g00713 1423 CDD Adenylation_DNA_ligase_I_Euk 1011 1263 - -
Bach1g00713 1423 Gene3D - 56 378 IPR036866 -
Bach1g00713 1423 NCBIfam ATP-dependent DNA ligase 833 1411 IPR000977 GO:0003910|GO:0005524|GO:0071897
Bach1g00713 1423 MobiDBLite consensus disorder prediction 632 653 - -
Bach1g00713 1423 Pfam ATP dependent DNA ligase domain 1022 1260 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bach1g00713 1423 Coils Coil 962 982 - -
Bach1g00713 1423 Gene3D - 1182 1265 - -
Bach1g00713 1423 Gene3D - 754 1021 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach1g00713 1423 Gene3D - 202 356 - -
Bach1g00713 1423 MobiDBLite consensus disorder prediction 452 471 - -
Bach1g00713 1423 Gene3D - 1266 1422 IPR012340 -
Bach1g00713 1423 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 754 1005 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach1g00713 1423 Gene3D DNA ligase/mRNA capping enzyme 1022 1141 - -
Bach1g00713 1423 SUPERFAMILY Nucleic acid-binding proteins 1269 1413 IPR012340 -
Bach1g00713 1423 MobiDBLite consensus disorder prediction 424 476 - -
Bach1g00713 1423 MobiDBLite consensus disorder prediction 569 595 - -
Bach1g00713 1423 FunFam DNA ligase 1265 1422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00713 Bach-Chr1 11027917 11042977 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00713 752 1413 Core DNA Replication Machinery Family AT1G08130 36.066 1.76e-147 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00713 - - gmx:100807673 1910.19