Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00693 ATGGCTTCGTCTCACTCTTTGATTGCTTTGGTGTTGTTGATGGCTTTCTCTATCCAAGCCATGGCAGATATTGATGGTACTTGGTATGATGCTCATGCAACCTTCTATGGTGACATGTCAGGTGGAGAAACCATGAAGGGGGCTTGTGGATATGGAAATCTCTTCGAGCAAGGGTATGGCCTCGAGACCACAGCACTAAGCATGGCTCTCTTCAACGATGGCAACACCTGTGGTGCTTGTTTTGAGATCATGTGCGTGAATGATCCCCAATGGTGCATCCCCTACGCAGGCACAATCAAAGTGACAGCAACCAATTACTGTCCTCCAAACTATGTTGATGGCAGTTGGTGCAACCCTCCACAGAAACACTTTGATTTATCCATGCCCATGTTCACCAAGATTGCTATATACAAAGCCGGGATCATCCCGGTTCGTTATCGGCAAATTCCCTGTGTCAAATATGGAGGGGTTAAGTTTCTACTTACTGGGAATCCTTATTGGTTACTAGTATTGGTGTATAACGTTGCTAATGCTGGTGATGTTTATGATGTTAAGATCAAAGGTTCCAATTGTACTAGTTGGATTCAGATGACAAGAAATTGGGGAGTGAATTGGCAAACTGGGGCTAATTTGGTAGGGCAAAGCTTGTCATTCCAAGTGAGTACTAGTGATGGAAAATGGATACAATTTGATGATGTTGTCCCATGGTATTGGCAATTTAGTCAGACCTATGAGGGCAAGTATAATTTTTAG 753 0.4356 MASSHSLIALVLLMAFSIQAMADIDGTWYDAHATFYGDMSGGETMKGACGYGNLFEQGYGLETTALSMALFNDGNTCGACFEIMCVNDPQWCIPYAGTIKVTATNYCPPNYVDGSWCNPPQKHFDLSMPMFTKIAIYKAGIIPVRYRQIPCVKYGGVKFLLTGNPYWLLVLVYNVANAGDVYDVKIKGSNCTSWIQMTRNWGVNWQTGANLVGQSLSFQVSTSDGKWIQFDDVVPWYWQFSQTYEGKYNF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00693 250 CDD DPBB_EXPA_N 28 151 - -
Bach1g00693 250 SUPERFAMILY PHL pollen allergen 154 246 IPR036749 -
Bach1g00693 250 Gene3D - 13 151 IPR036908 -
Bach1g00693 250 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 166 246 IPR007117 -
Bach1g00693 250 Pfam Lytic transglycolase 63 146 IPR009009 -
Bach1g00693 250 Pfam Expansin C-terminal domain 157 235 IPR007117 -
Bach1g00693 250 PANTHER EXPANSIN-A15 8 247 IPR002963 GO:0009664
Bach1g00693 250 SUPERFAMILY Barwin-like endoglucanases 27 174 IPR036908 -
Bach1g00693 250 PRINTS Expansin signature 155 167 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 131 144 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 58 72 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 232 248 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 203 224 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 85 96 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 114 131 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 167 188 IPR002963 GO:0009664
Bach1g00693 250 PRINTS Expansin signature 99 109 IPR002963 GO:0009664
Bach1g00693 250 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 156 IPR007112 -
Bach1g00693 250 SMART dpbb_1 63 146 IPR007112 -
Bach1g00693 250 Gene3D - 157 250 IPR036749 -
Bach1g00693 250 PRINTS Expansin/Lol pI family signature 194 208 IPR007118 GO:0005576
Bach1g00693 250 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Bach1g00693 250 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Bach1g00693 250 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Bach1g00693 250 PRINTS Expansin/Lol pI family signature 139 155 IPR007118 GO:0005576
Bach1g00693 250 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00693 Bach-Chr1 10804898 10806161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00693 24 250 Expansin Gene Family AT5G39300 63.755 1.50e-110 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00693 - - gab:108460016 380.563