Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00613 ATGACACACGCATTTGGTGTATATCCAAGTTTAGACTACATTGATTTGAGTCACAACAAGCTTTTTGGCAAGCTTTCCCCTAATTGGGGAAAGTGCCATAATCTTACAAGTCTTAAAATCTCCAACAAAAACTTATTCGGTGGCATACCACCAGAACTAGCTGAAGCAACCCAGCTACGTGTAATTCAACTTTCCTCAAATTGTTTGACTGGCAAGATTCCAAAAGAGTTGTTCAAGTTGACGTTATTGATTGAACTCTCCTTGAGCAATAATAAATTTTTGGGTAACATTCCCTTTGAAATTGGATCATTAGTTCAACTTGAAAATTTAGAGTTGGCGGTTAATAACTTAAGTGGCTCAATTCCAAAACAACTTGAAGGGTTGCTCCGCTTACGGAACTTGAATTTGAGCAGAAATTTTTTGGTGGAAAGCATTCCCTCTGAGTCAGGTCAATTGAAATCTCTTCAAAGTTTGGATGTTAGTTGCAACTTCTTGATCGGAAGAATACCAACAGAAATTGGGCAAGCTTCACGCTTGGAAACATTGAACTTGTCACATAATATATTGTCAGGTGTCATTCCATCTAGTTTTGATGATATGATGAGTTTGACTTCCATTGACCTATCATACAACCAATTGGAAGGACCACTTCCAAACATTCCAGCGTTCCATAATGCTACAATTGCAGTATTGAGAAATAATAAAGGCTTGTGTGGTAATGTCTCTGGTTTGATACCCTGTCCAACGGTTCAGCTTGACTCTTATGACAAAAAAAGCCACAAAATAATGGATGGTGTAAGAAATAATATGAAAGACTGTAGTGAAGCACATACTCAAAATGTTTTCTCCCTGTTGAGTTTTGACGGAAAAATAGCATATGAAAATATCATTGAAGCCACTGAGGAATTCAACGACAAGTATCTCATTGGGGAAGGAGGGAGTGCAAGTGTTTACAAAGCCCAGTTGGCTGATGGTCAAGTTGTTGTTGTGAAGAAATTTCACTCAATGGTAGATGGTGAAATGCTCAATTCAAAAGCATTTACAAACCAAGCTTACACAATGGAAGTGAATGAGAAATGTGACGTTTATAGCTTCGGAGTACTAGCCCTTGAGATGCTAATGGGGAAGCATCCAGGAGATCTCATTTCTTCATTGTCATCGTCTTCATCAACAGCTCGAGTTTTAGCATTGAATGATTTGTTAGATCTACGGCTTTCTCATCCTGTGTACCCAGTTGTTGAGCAGGTGATATTGACTGCAAATATAGCGCTTGCTTGCTTGAATGAAAGCCCTCACTCTCGTCCAACCATGGATCAAGTTGCTAAGGAGTTCGTCATGCCCAAATCAACTTCACTACACCAATTTCCTTTTGTATTATAA 1380 0.387 MTHAFGVYPSLDYIDLSHNKLFGKLSPNWGKCHNLTSLKISNKNLFGGIPPELAEATQLRVIQLSSNCLTGKIPKELFKLTLLIELSLSNNKFLGNIPFEIGSLVQLENLELAVNNLSGSIPKQLEGLLRLRNLNLSRNFLVESIPSESGQLKSLQSLDVSCNFLIGRIPTEIGQASRLETLNLSHNILSGVIPSSFDDMMSLTSIDLSYNQLEGPLPNIPAFHNATIAVLRNNKGLCGNVSGLIPCPTVQLDSYDKKSHKIMDGVRNNMKDCSEAHTQNVFSLLSFDGKIAYENIIEATEEFNDKYLIGEGGSASVYKAQLADGQVVVVKKFHSMVDGEMLNSKAFTNQAYTMEVNEKCDVYSFGVLALEMLMGKHPGDLISSLSSSSSTARVLALNDLLDLRLSHPVYPVVEQVILTANIALACLNESPHSRPTMDQVAKEFVMPKSTSLHQFPFVL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00613 459 ProSitePatterns Protein kinases ATP-binding region signature. 309 332 IPR017441 GO:0005524
Bach1g00613 459 Gene3D Ribonuclease Inhibitor 2 248 IPR032675 -
Bach1g00613 459 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 122 247 - -
Bach1g00613 459 SUPERFAMILY L domain-like 5 239 - -
Bach1g00613 459 Gene3D Transferase(Phosphotransferase) domain 1 337 453 - -
Bach1g00613 459 SUPERFAMILY Protein kinase-like (PK-like) 303 445 IPR011009 -
Bach1g00613 459 PANTHER LEUCINE RICH REPEAT KINASE 2 3 350 - -
Bach1g00613 459 Pfam Leucine rich repeat 34 93 IPR001611 GO:0005515
Bach1g00613 459 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Bach1g00613 459 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 3 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00613 Bach-Chr1 8225554 8227549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00613 1 370 Receptor kinase-like Gene Family AT4G08850 39.303 1.19e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach1g00613 LRR_8 2.4e-11 CL0022
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00613 - - tpra:123922968 381.333