Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00605 ATGGTCTTCATATTTCAACAGACCACTTCGCGGGTTCTATTAACGGCCTTGTTTTTCCTTGTAATAACCTGCTCAGCCCAGGTTGCTAGTTCTTCTAGAACAAGTTCCCTTGCTTTTGCTCCTCGTTCAGAGGTAAACAGCGAAGCAAATGCACTATTAAAGTGGAAAGCCAGCCTTGACAACCAAAGCCAAGTTCGTCTATCTTCTTGGACAGGTACTGGTCCTTGCAAATGGGATGGAATTACATGTGATGCTTCCAATTCCGTCTCCTCCATAATCCTTCAGCACCTTGGACTAAGAGGTATGCTTTACAGTCTCAGCTTTGCATCATTTCCCAACCTCCACAAAATGGATATAAGCAATAACTCATTTTATGGAACTATCCCCCACCAGATTCGTAACTTATCCAGTATTTTTCACTTGGATCTCTCTGAAAACTTATTCAGTGGCTCCATACCTGAAGAAATAGGATACTTGGTCGGTTTGAATGAGCTTAACCTTTATAATAACAAGCTCACTGGAGCAATTCCTTTTACTATTGGAAACTTGACAAAGCTTACTATACTAATGTTGCACACAAATAGACTTTCTGGATCCATCCCATCTTCCATAGGAAACATGATTGATTTGAATGAGCTTCACTTTTTTGAAAACAAACTCTCTGGATCAATTCCTATCACTATTGGGAATTTGACAAAGCTCACTGTGCTGTATTGTTATTCAACCAAACTTTCAGGGTCCATCCCATTTTCCATAGGAAACTTAATTGATTTGAATGATCTTGACCTTTCTCAAAACAAACTCTCTGGATCAATTCCTTCTACTTTAGGAAACTTAACAAAGCTCACTTTACTGTACTTGTTCAAAAATAGACTTTCTGGATACATCCCATATTCCATAGGAAACATGATAGATTTGAGTGAGCTTTTCCTTTATGAAAACAAGTTCTCTGGACCAATTCCTTCTACCATTGGGAACTTGATGAAGCTCACCATGTTATATTGTTACAAAACAAGAATTTCTGGGTCAATTCCGTTTTCCATAGGAAACTTGATCAATTTGAATGAGCTTGACCTTTCTGAAAATAAACTCTCTGGTCCAATTCCGTCTAGTATTGGGAACTTGACAAAGCTAACTATATTATACTTGTTCACAAATAGACTTTCTGAATCAATTCCAATTTCCATAGGAAACTTGATTGATTTGAGAGAACTTATCCTTTACAAAAATAGTCTCTCTGGACCAATTCCTTGTGGTATTGAAAACTTGACAAAGCTCACAATTTTGCACTTGTTCACAAATAAACTTTTTGGATTAATTCCATTTTCCATAAGAAACATGACTGGTTTAAATGAACTTGCTCTTCATGAGAACAAACTCTCCGGACCAATACCTTCTAGTATAGGGAACTTGACAAAGCTCACTAAATTGATCTTGTTCATAAATGAATTTTCTGGATCAATCCCATCTTCCATATCAAACTTGGTTGATTTGAATATCCTTAGCCTTGGCCAAAACAGACTCTCTGGTCCAATTCCGTCTAGTATTGGGAACTTGACAAAGCTCACTCAGTTAATCTTGCACTCAAATGCAATTTCTGGACCTATTCCTTCAAATATTGGGAAATTGACAAAGCTCAGATACTTTATTGCATGTAATAACTCTCTTAGCGGTCCAATTCCAGGTAGCTTGAAAAATTGTGCAAACCTTTATAGAGTTAGATTGGATGAAAACCAATTGACAGGAGATATAACACATGTAGTTGGAGTATATCCAAGTTTGGACTTTGTTGATTTAAGCGACAATAAACTTTATGGCCAACTTTCTCCAAATTGGGGGAAGTGTCATAACCTTACAAGCCTCAAAATCTCCAACAACAACTTATCTGGTGGCATACCACCTGTCCTAGCTGAAGCAACCCAGCTACAAGAACTTAAACTTTCCTCAAATCATCTAAGTGGCAGGATTCCAAAAGAGTTAGGCAAGTTAACATTGTTGATTAAACTCTCCTTGAGCAACAATAAATTTACAGGTAACATTCCCATTGAAATTGGGTCATTAGTTAAACTTGAAAGTTTGGAGCTGGCAGTTAATAGCTTAAATGGTTCAATCCCAAAACAACTTGAAGGGTTGCTTCGTTTATTGAACTTGAATTTGAGCAGGAATTTATTCAAGGAAAGCATTCCCTCTGAGTTAGGCCAACTGCAGTCTCTTCAAAATCTTGATCTCAGTGGCAACTTGTTGACTGGAACAATACCAACAACACTTGGGCAAGCTCCACGCTTGGAAATATTAAACTTGTCACATAATAATCTTTCAGGTGTCATTCCATCTAGTTTTAATGGCATGATGAGCTTAACTTCCATTGACATATCATACAACCAGTTAGAGGGACCACTTCCAAACATTCCGGCCTTCCGTAATGCTACAGTTGTAGTATTGAGAAATAATAAAGGCATATGTGGCAATGTCTCTGGTTTAATGGCCTGCCTTACAGTTCAGCATAATTCTCACAGTCAAAAGAGCCATAAAATGATGTTACTAGTTCTACTCCTTACTTTGGGGGCACTAATGCTAGTATTATTTGTAGTGGGATCTGCATGGTTTCTTTGTTGTGGTGAAAGAAATAAATTAAGTGAGGGTAGTGAAGCACAAACTCAAAATGCTTACTCTATATGGAGTTTTGATGGAAAAAGAACATTTGAAGATCTCATTGAAGCCACTGAGGAATTCAACAACAAATATCTCATTGGGGAAGGAGGATGTGCTAGTCTTTACAAAGCTCAGTCACCCGATGGTCAAGTTGTTGTTGTGAAGAAATTTCACTCGATGTTAGATGATGAAATGCCCAATATAAAAGCATTTACAAATGAGATTCAGGCCTTGACTGAAATTAGGCATCGAAATATTGTGAAACTATATGGATTTTGTTCACATCCAAAGTTCTCATTTTTGGTTTATGAGTTCTTGGAAGGGGGTAGCTTGGATAAGATACTTGACAACGAAGCACAATCAATTGCATTGGATTGGCATAGAAGGGTGAACATTGTTAAAGGTGTGGCTAATGCTTTATCATATATGCACCATGATTGTTCACCTCCAATAGTTCACCGTGACATATCATGTAAGAATATTCTTTTAGATTTGGAATATGAGGCCCACATCTCTGACTTCGGAACAGCTAAGCTTCTAAATGTCGACTCATCCAATTGGACCTCATTTGCTGGCACTTTTGGGTATGCTGCTCCAGAGCTTGCTTATACAATGGAAGTGAATGAGAAATGTGATATTTATAGTTTCGGAGTACTAACCTTGGAGATACTAATGGGGAAGCATCCAGGAGATCTCATTTCTTCATTGTCTTCGTCTTTATCAACGACTCATAATTTGGCATTGAAGCATTTGTTGGATCAACGGCTTTCTCATCCCGTGAACCCAATTGCTAAGGAGGTTATCTTGATAGCAAATATAGCATTTGCATGCTTGAGTGAAAATCCACATTCTCGTCCAACCATGGATCAAGTGACTAAAGAGTTCTTCCTCTCCTCTCAACGTCATTGCACCAATTCAACACTATCACTCCTGAACAACTCCACCTGA 3600 0.38 MVFIFQQTTSRVLLTALFFLVITCSAQVASSSRTSSLAFAPRSEVNSEANALLKWKASLDNQSQVRLSSWTGTGPCKWDGITCDASNSVSSIILQHLGLRGMLYSLSFASFPNLHKMDISNNSFYGTIPHQIRNLSSIFHLDLSENLFSGSIPEEIGYLVGLNELNLYNNKLTGAIPFTIGNLTKLTILMLHTNRLSGSIPSSIGNMIDLNELHFFENKLSGSIPITIGNLTKLTVLYCYSTKLSGSIPFSIGNLIDLNDLDLSQNKLSGSIPSTLGNLTKLTLLYLFKNRLSGYIPYSIGNMIDLSELFLYENKFSGPIPSTIGNLMKLTMLYCYKTRISGSIPFSIGNLINLNELDLSENKLSGPIPSSIGNLTKLTILYLFTNRLSESIPISIGNLIDLRELILYKNSLSGPIPCGIENLTKLTILHLFTNKLFGLIPFSIRNMTGLNELALHENKLSGPIPSSIGNLTKLTKLILFINEFSGSIPSSISNLVDLNILSLGQNRLSGPIPSSIGNLTKLTQLILHSNAISGPIPSNIGKLTKLRYFIACNNSLSGPIPGSLKNCANLYRVRLDENQLTGDITHVVGVYPSLDFVDLSDNKLYGQLSPNWGKCHNLTSLKISNNNLSGGIPPVLAEATQLQELKLSSNHLSGRIPKELGKLTLLIKLSLSNNKFTGNIPIEIGSLVKLESLELAVNSLNGSIPKQLEGLLRLLNLNLSRNLFKESIPSELGQLQSLQNLDLSGNLLTGTIPTTLGQAPRLEILNLSHNNLSGVIPSSFNGMMSLTSIDISYNQLEGPLPNIPAFRNATVVVLRNNKGICGNVSGLMACLTVQHNSHSQKSHKMMLLVLLLTLGALMLVLFVVGSAWFLCCGERNKLSEGSEAQTQNAYSIWSFDGKRTFEDLIEATEEFNNKYLIGEGGCASLYKAQSPDGQVVVVKKFHSMLDDEMPNIKAFTNEIQALTEIRHRNIVKLYGFCSHPKFSFLVYEFLEGGSLDKILDNEAQSIALDWHRRVNIVKGVANALSYMHHDCSPPIVHRDISCKNILLDLEYEAHISDFGTAKLLNVDSSNWTSFAGTFGYAAPELAYTMEVNEKCDIYSFGVLTLEILMGKHPGDLISSLSSSLSTTHNLALKHLLDQRLSHPVNPIAKEVILIANIAFACLSENPHSRPTMDQVTKEFFLSSQRHCTNSTLSLLNNST 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00605 1199 Pfam Leucine rich repeat N-terminal domain 46 84 IPR013210 -
Bach1g00605 1199 Gene3D Transferase(Phosphotransferase) domain 1 990 1192 - -
Bach1g00605 1199 SMART LRR_sd22_2 687 713 - -
Bach1g00605 1199 SMART LRR_sd22_2 735 769 - -
Bach1g00605 1199 SMART LRR_sd22_2 255 281 - -
Bach1g00605 1199 SMART LRR_sd22_2 351 377 - -
Bach1g00605 1199 SMART LRR_sd22_2 495 521 - -
Bach1g00605 1199 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1035 1047 IPR008266 GO:0004672|GO:0006468
Bach1g00605 1199 SMART LRR_typ_2 760 782 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 255 279 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 735 759 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 375 399 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 447 471 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 351 374 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 159 182 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 519 543 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 663 687 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 183 207 IPR003591 -
Bach1g00605 1199 SMART LRR_typ_2 423 446 IPR003591 -
Bach1g00605 1199 Pfam Protein kinase domain 913 1179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00605 1199 ProSiteProfiles Protein kinase domain profile. 911 1181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00605 1199 ProSiteProfiles Leucine-rich repeat profile. 761 782 IPR001611 GO:0005515
Bach1g00605 1199 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 318 418 - -
Bach1g00605 1199 FunFam Nuclear pore complex protein NUP107 45 196 - -
Bach1g00605 1199 FunFam Leucine-rich repeat receptor protein kinase MSP1 874 989 - -
Bach1g00605 1199 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 544 834 - -
Bach1g00605 1199 Gene3D Ribonuclease Inhibitor 201 293 IPR032675 -
Bach1g00605 1199 Gene3D Ribonuclease Inhibitor 294 395 IPR032675 -
Bach1g00605 1199 Gene3D Ribonuclease Inhibitor 44 200 IPR032675 -
Bach1g00605 1199 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 198 298 - -
Bach1g00605 1199 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 570 1179 - -
Bach1g00605 1199 FunFam MDIS1-interacting receptor like kinase 2 990 1185 - -
Bach1g00605 1199 SUPERFAMILY L domain-like 186 436 - -
Bach1g00605 1199 FunFam Piriformospora indica-insensitive protein 2 440 538 - -
Bach1g00605 1199 SUPERFAMILY L domain-like 92 225 - -
Bach1g00605 1199 Gene3D Ribonuclease Inhibitor 398 548 IPR032675 -
Bach1g00605 1199 Gene3D Ribonuclease Inhibitor 549 830 IPR032675 -
Bach1g00605 1199 PRINTS Leucine-rich repeat signature 258 271 - -
Bach1g00605 1199 PRINTS Leucine-rich repeat signature 351 364 - -
Bach1g00605 1199 Gene3D Phosphorylase Kinase; domain 1 874 989 - -
Bach1g00605 1199 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Bach1g00605 1199 Pfam Leucine rich repeat 737 796 IPR001611 GO:0005515
Bach1g00605 1199 SUPERFAMILY Protein kinase-like (PK-like) 892 1181 IPR011009 -
Bach1g00605 1199 SUPERFAMILY RNI-like 482 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00605 Bach-Chr1 7946786 7950648 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00605 164 705 Receptor kinase-like Gene Family AT4G08850 36.508 6.39e-95 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach1g00605 Pkinase 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00605 - - csin:114301043 1142.87