Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00581 ATGTTGAAACAAGACTCCGGTGGTGATGGCGGCGGCAGCTGTAATAACTGGCCACGTGTCTGTGACTCATGCCGTGCCGCGGCATGCACAGTGTACTGCCGCGCCGACTCGGCGTACCTCTGCGTCGGCTGCGACGGTCGTATCCACGCCGCCAACCGGGTGGCTTCGCGGCATGAACGTGTGTGGGTGTGTGAGGCATGTGAACATGCCCCGGCTGCATTTCTATGCAAAGCCGATGCTGCTTCCCTCTGTGCTACCTGTGACGCCGAAATCCACTCGGCGAATCCGCTGGCTAGCCGCCACCACCGTGTCCCGATTCTGCCAATTTCCGGTTGCCTCTATGGTCCCCCAGCTACACAGGTGAGCTCAGCAGTTGATGGGGAGGAGCGGTTTTTAAAATATGGAGGTGAAGAAGAAGAGGAGGCCATGGGTGAGGAAGATGAAGATGAGGCAGCTTCATGGTTGTTGCTCAATCCAGTGAAGAATAACAACAATCAGAGCAATGGGTTTTTGTTTAATGGGGAAGTTGATGAATATTTGGACCTTGTGGATTGCAACTCTTGTGGTGATCATAGCCAGTTCACTGATCAGTATAATCAGAATCAGCCGCAACAGCATTACGGTGTTCCTCACAAGAGCTATGGCGGTGATAGTGTGGTTCCTGTTCAGTGCGGCGACGGGAAAACTCATCAGCTGCAGCAGCAGCAAGCACAGCATTTTCAGCTGGGTTTGGACTTTGAGCCCTCAAAAGCAGCAGCAGCCTACAGTTACAATGCTTCCCTTAGTCATAGTGTTTCCCTCTCATCAATAGATGTTGGAGTTGTACCAGAATCAACAATGAGTGATGTCTCAATTTCCCACCCAAGACCCTCAAAAGGGACAATTGACCTTTTCTCTGGACCTCTCATTCAGTTGCCTAGCCAATTTACACCAATGGACAGGGAGGCCAGGGTCTTAAGATATAGGGAGAAAAAGAAGACAAGGAAGTTTGAGAAGACAATTAGGTATGCTTCAAGGAAAGCCTATGCAGAGACCAGACCTCGTGTCAAAGGCAGATTTGCAAAGAGAACAAATGTAGAAGCCGAAGTTGATCAGATGTTCTCCACAAAACTCATGACTGAAACTGGCTATGGAATTGTTCCCTCTTTCTGA 1152 0.5009 MLKQDSGGDGGGSCNNWPRVCDSCRAAACTVYCRADSAYLCVGCDGRIHAANRVASRHERVWVCEACEHAPAAFLCKADAASLCATCDAEIHSANPLASRHHRVPILPISGCLYGPPATQVSSAVDGEERFLKYGGEEEEEAMGEEDEDEAASWLLLNPVKNNNNQSNGFLFNGEVDEYLDLVDCNSCGDHSQFTDQYNQNQPQQHYGVPHKSYGGDSVVPVQCGDGKTHQLQQQQAQHFQLGLDFEPSKAAAAYSYNASLSHSVSLSSIDVGVVPESTMSDVSISHPRPSKGTIDLFSGPLIQLPSQFTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRVKGRFAKRTNVEAEVDQMFSTKLMTETGYGIVPSF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00581 383 ProSiteProfiles Zinc finger B-box type profile. 59 106 IPR000315 GO:0008270
Bach1g00581 383 SMART bboxneu5 16 63 IPR000315 GO:0008270
Bach1g00581 383 SMART bboxneu5 64 106 IPR000315 GO:0008270
Bach1g00581 383 ProSiteProfiles Zinc finger B-box type profile. 16 63 IPR000315 GO:0008270
Bach1g00581 383 CDD Bbox1_BBX-like 63 106 - -
Bach1g00581 383 Pfam B-box zinc finger 61 106 IPR000315 GO:0008270
Bach1g00581 383 Pfam CCT motif 314 356 IPR010402 GO:0005515
Bach1g00581 383 CDD Bbox1_BBX-like 20 63 - -
Bach1g00581 383 ProSiteProfiles CCT domain profile. 314 356 IPR010402 GO:0005515
Bach1g00581 383 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 21 371 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00581 Bach-Chr1 7587004 7589362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00581 1 383 C2C2-CO-like Transcription Factor Family AT3G02380 59.481 5.89e-146 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach1g00581 zf-B_box 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00581 K12135 - jre:109001350 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach1g00581 1 7587004 7589362 Bach8g02498 8 31072482 31075197 BWGD