Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00574 ATGCGGCTCCGTTGTTTTCACCGGCCTCATATCAACTTCTCACTCTCAGTTAAAGGTTCAATGGCGTCGAAAAAGGAAAGCGAAAATTCATCCGATACTACTCCATCATCGCCAAAGATTATATACAAAGATCCAGATGACGGGCGGCAGCGATTTTTGCTTGAATTGGAATTCGTTCAGTGCCTTGCTAATCCCACCTACATCCACTATTTGGCTCAGAACCGGTATTTTGAGGATGAAGCATTCATTGGATATTTGAAGTACCTTCAATATTGGCAACGGCCTGAATACCTCAAATTTATCATGTATCCTCATTGCCTCTTTTTTCTTGAACTGCTTCAGAATGCTAACTTTCGTAATGCAATGGCACATCCTGGCAATAAAGAACTGGCACATAGACAACAATTCTACTTCTGGAAGAACTATAGGAACAACAGGCTAAAACACATTTTACCAAGATCGCTTCCAGAGCCTAGTGCTACCCCTGCACCTCCTGCTCCTGTGTCAACTCCTTCTCAGCCGTCTGTACCTGCTCTGCCGCCAGGACCAGCTACAAATGTTGCTGGAACACCATCATCTGCACAAGCTCTTTCTCCAATGCCGTATGGCATGCCCCCTGGATCATCTCTTGCAAAAAATGATATGAGGAATCCTGCAGTTGATAGAAGGAAGAGAAAGTGAGTGTTTCTACTTGAATCATTGTCTTCTTTAGAAGAAACACACACCCATTTAGCGGTCGTCCACTCTGATAGAACTAGTTTGTGTTCCTCTATTTGGTGTATATTTTTTCTTTTCTGGCCTTGGTATTAGGTGTACACTGAATCTTCTTGCAGCGAAGACATGTAAAATTGATTGTATATTGACTGAGGTGATTGTGTTTATTTCTTTCCTTTTGCGTAGATTGAAGCAAGG 912 0.4243 MRLRCFHRPHINFSLSVKGSMASKKESENSSDTTPSSPKIIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDEAFIGYLKYLQYWQRPEYLKFIMYPHCLFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRSLPEPSATPAPPAPVSTPSQPSVPALPPGPATNVAGTPSSAQALSPMPYGMPPGSSLAKNDMRNPAVDRRKRK 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00574 226 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 21 226 IPR008831 GO:0003712|GO:0006355|GO:0016592
Bach1g00574 226 MobiDBLite consensus disorder prediction 22 44 - -
Bach1g00574 226 FunFam Mediator of RNA polymerase II transcription subunit 31 38 139 - -
Bach1g00574 226 MobiDBLite consensus disorder prediction 157 181 - -
Bach1g00574 226 MobiDBLite consensus disorder prediction 22 38 - -
Bach1g00574 226 MobiDBLite consensus disorder prediction 153 226 - -
Bach1g00574 226 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 37 139 IPR038089 -
Bach1g00574 226 Pfam SOH1 50 142 IPR008831 GO:0003712|GO:0006355|GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Bach1g00574 Med31 5.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00574 K15153 - gmx:100527879 340.502