Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00572 ATGGCCAAATCCTCCAACTCTGAACTTGCTCGTGCTCCTATCATCTCAGAAGATTCTGAAGAATCACACCCAAATGGTTCATTATATCCCCTTGACCATTTGGGCGTCGAGAATCCCTTTCACTCTTTTGGCCCTTTTACACCCGAATTATCCTTCGACCACAGAAGCAATCATGTGGATTGGTACTCTGATTCGGACACCGATTCGGTGAGTTGCTTTGTCACAGATCTTTTTGAAAGTCGCTCCTCCCAGCAATCTCACCCTTGCTGTGACGAGGGGTCTGATATAAATCCCTTTTCTGGGGTTGTTTACGATAATGATGAAGAAGAGGAGGAATTAGAGTTAGGGTTTGGGTTTGAAAATAATGATGGGGTTGTTGAGAATTCGAGTTCAGAACGGGTTAATTTGCATGGGGATGGCCTTCGGGTTGTTGGGTTCAATTCTGATTCAGATTCCCATAGTGTGGAAGAGATTGGTAGGGCTATGGAATTGTATTCTGGAGAAAATGATGATAATAGAAATAGTGGGTTTGATGATTTTGATGTTCGTATGTATTGGGATAGGCTTTGTTTGGAGGAGCAAAGGATCCTCAACGAAAATTTGGAATGGGAGGAAGTAGAGGAAAGGGTCAATGAGAGCTTTGTGATTGATGAGGTTGATGATCGTTCAGTAATATCTGGACTTTCTAACGTAGAAGAAACAGGAGAAGATGCACTGAGATACCTTGAATGGGAAATTCTGATGGCAGTTAACAATTTGGAGAGGAATATGGAGTTGGAAAATGATGACTACATATATGCAGCTGAATATGATGTTCTTTTCGGGCAATTTGTGGACAATGATAGTGCCTCAAAGGGTAGTCCGCCTGCAGCCAAAAGTGTTGTGGAGAATCTTCCTCTTGTAGAATTAACAAAGGAGGAGTTGCAGGGAAGGAATGTAGCATGTGCCATTTGCAAAGATGAGATCTTATTGGAGGAGAAGGTGAGGAGGCTTCCCTGTTCACACTGTTATCATGGAGACTGCATCATGCCATGGTTGAGCATTCGTAATACATGCCCTGTTTGTCGGTTTGAGTTGCCCACAGATGATCCTGATTATGAGCAGAGGAAGAGTCAAAGAACTGCTCTTGATCTTTTGGAGTTGGCAGGGCAGATGCAATTTTGA 1164 0.4304 MAKSSNSELARAPIISEDSEESHPNGSLYPLDHLGVENPFHSFGPFTPELSFDHRSNHVDWYSDSDTDSVSCFVTDLFESRSSQQSHPCCDEGSDINPFSGVVYDNDEEEEELELGFGFENNDGVVENSSSERVNLHGDGLRVVGFNSDSDSHSVEEIGRAMELYSGENDDNRNSGFDDFDVRMYWDRLCLEEQRILNENLEWEEVEERVNESFVIDEVDDRSVISGLSNVEETGEDALRYLEWEILMAVNNLERNMELENDDYIYAAEYDVLFGQFVDNDSASKGSPPAAKSVVENLPLVELTKEELQGRNVACAICKDEILLEEKVRRLPCSHCYHGDCIMPWLSIRNTCPVCRFELPTDDPDYEQRKSQRTALDLLELAGQMQF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00572 387 SMART ring_2 315 355 IPR001841 -
Bach1g00572 387 SUPERFAMILY RING/U-box 303 363 - -
Bach1g00572 387 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 200 360 - -
Bach1g00572 387 Pfam Ring finger domain 315 356 IPR001841 -
Bach1g00572 387 FunFam E3 ubiquitin-protein ligase RING1-like 276 362 - -
Bach1g00572 387 ProSiteProfiles Zinc finger RING-type profile. 315 356 IPR001841 -
Bach1g00572 387 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 275 362 IPR013083 -
Bach1g00572 387 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00572 Bach-Chr1 7505100 7506263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00572 140 371 C3H Transcription Factor Family AT3G02340 40.000 3.60e-48 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00572 - - pcin:129304768 451.44