Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00563 ATGCAAAGTTGTCTCCTTTCAAGGTTAACTGCTTCAAAACCACGCAGGAACTCGACCCAATTGGGTTTTCTCCTGCAGAATGCTTTCCTGATTTTTAATTCATTCACATGTAAATCTAATTCCCAATTGCAAGAAAATGATTCGTTTACTGTGTCATATCTCATCAATTCATGTGGGTTGTCTCCCAAAGCGGCCATTCAAGCATCAAAATCCATTCGATTCGAAAACCCTGATAAACCCAACTTGATTCTTTGTTTTCTTAGAAACTACGGGTTTTCAGAAATCCAGTTATCCAAACTTGTGAAGAGACGTGCAAAAGTGCTTGTAGCAGATCCTGAGAAAACATTTCTGCCCAAAATGAAGTTCTTGCAGTCTATTGGGATTTCAAACACTGATCTCCCAGAAATTATTGTTGCTAACACTGAGCTCTTAACCAGGAGCTTAGATAATTGTCTTATCCCTCGATATAGATTTCTAAAGAGTATACTTTCTACCGACGAGGAAGTAATACAATCCCTTAAATTTGGAAAGAGGTCTTTTAGTAATCAAGATATGGATGACATAGTTGCGAACATAAAGCTTTTGAGAGAAATAGGAGTGCCTCAACGTTTTGTTTGTTATCTGGTAAGAGGTCTTCCGGAAGTGGCTTTTCTCAAACATGTAAAGTTTTCTGAAGCTTTCAAGTCAGTTTTGGAAATGGGATTTGATCCTTCGAAATCATTGTTTATCAGTGCTATCAATGTACTTGCAAAACTGAAGCAACCAATGTGGGAATCAAGATTGAAGACTTTTGAGAGGTGGGGTTGGACTAGGGAAGTGGCTCTTTCAGCATTCAAAACGATGCCAATTTGTATGTTAACCTCGGAAGAGAAAATCGGGAAGGTGATGCATTTTCTTGTGAATGAAATGGGTTATGCATCAGAAGATATTGCTCATTTTCCGTTTGTTCTTAAGTACAGCTTGGAGAGGAGGATTATCCCTAGATGTTCGGTTGTTCAGATTCTGAAATCTAAGCATTTGATTAAGAATGATACGCGCCTTCGTAGTTTCATTCTTTTAACTGAGAAAAAGTTTTCCGAGTGCTTTGTGAGCAGATTAGAGTACCACAATGATGGTCTGTTAAGTCCACCTGTTGTCTTCCAGTCCTAG 1149 0.3856 MQSCLLSRLTASKPRRNSTQLGFLLQNAFLIFNSFTCKSNSQLQENDSFTVSYLINSCGLSPKAAIQASKSIRFENPDKPNLILCFLRNYGFSEIQLSKLVKRRAKVLVADPEKTFLPKMKFLQSIGISNTDLPEIIVANTELLTRSLDNCLIPRYRFLKSILSTDEEVIQSLKFGKRSFSNQDMDDIVANIKLLREIGVPQRFVCYLVRGLPEVAFLKHVKFSEAFKSVLEMGFDPSKSLFISAINVLAKLKQPMWESRLKTFERWGWTREVALSAFKTMPICMLTSEEKIGKVMHFLVNEMGYASEDIAHFPFVLKYSLERRIIPRCSVVQILKSKHLIKNDTRLRSFILLTEKKFSECFVSRLEYHNDGLLSPPVVFQS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00563 382 FunFam Mitochondrial transcription termination factor-like 148 370 - -
Bach1g00563 382 Pfam mTERF 252 358 IPR003690 GO:0003690|GO:0006355
Bach1g00563 382 Pfam mTERF 85 236 IPR003690 GO:0003690|GO:0006355
Bach1g00563 382 Gene3D Transcription termination factor 3, mitochondrial 152 370 IPR038538 -
Bach1g00563 382 PANTHER CGI-12 PROTEIN-RELATED 46 365 IPR003690 GO:0003690|GO:0006355
Bach1g00563 382 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Bach1g00563 382 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Bach1g00563 382 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Bach1g00563 382 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00563 Bach-Chr1 7446275 7447423 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach1g00563 mTERF 1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00563 K15031 - qsu:111998476 358.607