Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00562 ATGCACAGTTCTCTCCTTTCAAGGTTAATTGCTTCAAATCCATGCAGGAACTCGACCCAATTGGGTTTTCTTACCCAGAATGCCTTCCTTATTTTTAATTCCTTCACATGTAAACCTAATTCCCAATTGCAAGAAAACGATTCGTTTACTGTGTCATATCTCATCAATTCATGTGGGTTGTCTCCCAAAGCGGCCATTCAAGCATCAAAATCCATTCGATTCGAAAACCCTGATCAACCCAACTCGATTCTTAATTTTCTTAGAAACTACGGGTTTTCAGAAATCCAGTTATCCAAACTTGTGAAGAGACGTGCACAAGTGCTTGCAGCAGATCCTGAGAAAACATTTCTGCCCAAAATGAAGTTCTTGCAGTCTATTGGGGTTTCAAACACTGATCTCCCAGAAATTATTGTTGCTAACACTGAGCTCTTAACCAGGAGCTTAGATAATTGTCTTATCCCTCGATATAGAGTTCTAAAGAGTATACTTTCTACCGACAAGGAAGTAATACAAGCCCTTAAATTTGGAAAGTGGTCTTACAGTAATCAAGATATGGATGACATAGTTGCGAACATAAAGCTTTTGAGAGAAGTTGGAGTGCCTCAACGTTTTGTTTCTCTTCTGCTAACTTGTAATCCGGAAGTGGCTTTTCTCAAACATGTAAAGTTTTCTGAAGCTTTCAAGTCAGTTTTGGAAATGGGATTTGATCCTTCGAAATCATTGTTTATCAGTGCTATCAATGTACTTGCAAAACTGAAGCAACCAATGTGGGAATCAAGATTGAAGACTTTTGAGAGGTGGGGTTGGACTAGGGAAGTGGCTCTTTCAGCATTCAAAACGATGCCAGTTTGTATGTTAACCTCGGAAGAGAAAATCGGGAAGGTGATGCATTTTCTTGTGAATGAAATGGGTTATGCATCAGAAGATATTGCTCATTTTCCGTTTGTTCTTAAGTACAGCTTGGAGAGGAGGATTATCCCTAGATGTTCGGTTGTTCAGACTCTGAAATCTAAGCATTTGATTAAGAATGATACGCGCCTTCGTAGTTTCATTCTTTTAACTGAGAAAAAGTTTTCCGAGTGCTTTGTGAGCAGATTAGAGTACCACAATGATGGTCTGTTAAGTCCATCTGTTGCCTTCCAGTCCTAG 1149 0.3934 MHSSLLSRLIASNPCRNSTQLGFLTQNAFLIFNSFTCKPNSQLQENDSFTVSYLINSCGLSPKAAIQASKSIRFENPDQPNSILNFLRNYGFSEIQLSKLVKRRAQVLAADPEKTFLPKMKFLQSIGVSNTDLPEIIVANTELLTRSLDNCLIPRYRVLKSILSTDKEVIQALKFGKWSYSNQDMDDIVANIKLLREVGVPQRFVSLLLTCNPEVAFLKHVKFSEAFKSVLEMGFDPSKSLFISAINVLAKLKQPMWESRLKTFERWGWTREVALSAFKTMPVCMLTSEEKIGKVMHFLVNEMGYASEDIAHFPFVLKYSLERRIIPRCSVVQTLKSKHLIKNDTRLRSFILLTEKKFSECFVSRLEYHNDGLLSPSVAFQS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00562 382 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Bach1g00562 382 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Bach1g00562 382 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Bach1g00562 382 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Bach1g00562 382 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Bach1g00562 382 Gene3D Transcription termination factor 3, mitochondrial 152 370 IPR038538 -
Bach1g00562 382 PANTHER CGI-12 PROTEIN-RELATED 46 365 IPR003690 GO:0003690|GO:0006355
Bach1g00562 382 FunFam Mitochondrial transcription termination factor-like 148 370 - -
Bach1g00562 382 Pfam mTERF 84 236 IPR003690 GO:0003690|GO:0006355
Bach1g00562 382 Pfam mTERF 253 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00562 Bach-Chr1 7440714 7441862 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bach1g00562 mTERF 3.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00562 K15031 - qsa:O6P43_021047 359.762