Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00544 ATGGCTAGGTCTGCACAAGGCCAGCAAGAAGAATTGGAAGACGACGATGAAGAGCACCTCACTGGGAATGGCTCTTCTTCACAGAAAGTGAAGCTTGATGAAGCGAACAGGGAGCAGAGGGTGAATACACATCGTTCAAAGCATTCGGAAACTGAGCAACGTAGAAGGAGCAAGATTAATGAGAGATTTCAGATTCTGAGGAATCTCATACCTCAAAATGATCAAAAAAGAGACAAGGCTTCATTTTTGTTGGAGGTTATTGAGTATATTCAGTTTTTACATGAAAAGCTACAAGTGTATGAGCAGTCTTACCAAGGGTGGAGTCAGGGGCCAACGAAATTACTTCCATGGAGAAATCATGGTGGGCCTGCAGAAAATATTATGGACCATCATCAAGCTTTAGAAAATGGTTCTGCTCATGAAAACGATGATGTCATTTCTTCATCATTACCAACAAATGCACAAAATTCAATAGAATCTAACTTGTTGGCAACTACTGTTCCGAAGGCTTACCCCCATGGTTCAGCAGCTGAAGCAATTCCCTTGACCGTGCAAATGCATTCGGACTTTTTTGACTCAGTTATGAGTGGTGGTATGCTGACCGGACATTTGCAGGAGTCTCTATCTAATGCTGAGAACATGTCTTCCCATCCTCAACATGAAGAGTGGATTGACAGACCAAATGAGAGCAACTGTGCTATTCCTGATAATTCATCAAAGGAACATGCAGAGCTTGATGGTGGATCCATTAGCATCTCAAATTCATACTCGCAGGGAATATTAAATACTCTTACCCAAGTGCTGCAATCTTCGGGTGTGGACATGTCCCAGGCCAGTGTGTCAGTGCAAATTGATGTTGGAAAAAGAGCAAATGCTGCCTCCACATCTACCTCAAAGAGTCATGAAAATCAATATGTAAACAACGGAGTGATGGCATGTTCAGGAGTTGATTGCTGCAATGAGGAATCTGAACAAACTCTGAAACGGCTCAGAACAGAAGCAAGCTAG 1008 0.4266 MARSAQGQQEELEDDDEEHLTGNGSSSQKVKLDEANREQRVNTHRSKHSETEQRRRSKINERFQILRNLIPQNDQKRDKASFLLEVIEYIQFLHEKLQVYEQSYQGWSQGPTKLLPWRNHGGPAENIMDHHQALENGSAHENDDVISSSLPTNAQNSIESNLLATTVPKAYPHGSAAEAIPLTVQMHSDFFDSVMSGGMLTGHLQESLSNAENMSSHPQHEEWIDRPNESNCAIPDNSSKEHAELDGGSISISNSYSQGILNTLTQVLQSSGVDMSQASVSVQIDVGKRANAASTSTSKSHENQYVNNGVMACSGVDCCNEESEQTLKRLRTEAS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00544 335 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 3 332 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bach1g00544 335 MobiDBLite consensus disorder prediction 31 57 - -
Bach1g00544 335 MobiDBLite consensus disorder prediction 214 246 - -
Bach1g00544 335 SMART finulus 49 99 IPR011598 GO:0046983
Bach1g00544 335 Gene3D - 40 112 IPR036638 GO:0046983
Bach1g00544 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 120 IPR036638 GO:0046983
Bach1g00544 335 FunFam BHLH domain class transcription factor 41 113 - -
Bach1g00544 335 Pfam Helix-loop-helix DNA-binding domain 45 93 IPR011598 GO:0046983
Bach1g00544 335 MobiDBLite consensus disorder prediction 1 57 - -
Bach1g00544 335 CDD bHLH_AtBIM_like 42 118 - -
Bach1g00544 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00544 Bach-Chr1 7176048 7181085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00544 3 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 38.835 3.89e-56 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach1g00544 HLH 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00544 - - qsa:O6P43_009208 409.838