Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00538 ACAAATATAAGCTGCTTAGCCATATTACAGGGACATCTAAAACGAAGAGGGAGGGTACTTGTTTGCGGAGGCAACCTAACTTCTGCGAGCTTAGCATCCTCTCTACTTCTCTACTAATCAAAGCATTGTTAGTTCTTTTGGAGGCGCTTTCTCTCAACACTAGCATGTAGTGGCATCCATTTTGTTGATCAATTGAAAGAGCGGGAAAAATTTAAGCTAAAGAAAGAGTTGGAGCTGGCAAAATGGGTTCTGTTTGTTGTTGTTTAAGTGTTGACGATCTTGGAGATTATGTAAATCCAAATAGTTCAGTATATAGGAACTGTGTGTGTCTCAGTTGCTTCATACACAACTTTCTGAATGTGTATACATCAATATTCCGCAGAGGAGAAGTGCATTCTATTCCTTCATCTATACAGGGGGCAGCATCTATGACATCTACTGCTTCACTTGATAATTCTCTATCTGACATGTATCGCTCTCCTCCAAGACCCTTGCCATATGATGCAGACCCCAGGTTTTTCCGTTCACAGCGTGATGGACTAGTTTCAAGACGAGAGAAAGGTTCAAGTCATTCAAATGAAGAGACAGAACCTCTAAGAGGTGATATAGATATGGACCCAGAATCTTTAAATTTGGGAGACAAATGGAATGAGATTGCTTGTGAAGATGGATCAAAGGAACACCGTTTGAAGTCCTCTCTAAGATTCTCATCAGCAAAATATACAACTGCAGTTGGCCTTACAAATGCATCAACAGAAGAAGAGGATATTTGCCCGACTTGTCTTGAAGAATATACTGAAGAAAATCCGAAGATAATGACAAAATGCTTTCATCATTTTCATCTTGGTTGCATTTATGAGTGGATGGAAAGAAGTGATATTTGTCCTGTCTGTGGGAAGGTGATGGTATTCGATGAAACGACCTAATCTTTTGACCAGAAGTGTTGTGTCGTGGATGAAGCCAGCTAAGCTAAAGAGGAAAAAGAAGAATATAAGTGTAACAGATATTGTGAATACCGCAAGTTAAGTGCTTGTCTTGTACAGTAAGTATATAAGTTTTCTCAACCATTTGTAATTTCAACTTGATCCAAGTTGCTTTTGACATTCAACTTTTCCTCTTTTCAAAAACTATGAAAGAAAGAAAATTGC 1148 0.3859 MGSVCCCLSVDDLGDYVNPNSSVYRNCVCLSCFIHNFLNVYTSIFRRGEVHSIPSSIQGAASMTSTASLDNSLSDMYRSPPRPLPYDADPRFFRSQRDGLVSRREKGSSHSNEETEPLRGDIDMDPESLNLGDKWNEIACEDGSKEHRLKSSLRFSSAKYTTAVGLTNASTEEEDICPTCLEEYTEENPKIMTKCFHHFHLGCIYEWMERSDICPVCGKVMVFDETT 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00538 227 CDD RING-H2_AIRP1-like 173 221 - -
Bach1g00538 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 154 224 IPR013083 -
Bach1g00538 227 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 60 225 - -
Bach1g00538 227 ProSiteProfiles Zinc finger RING-type profile. 177 217 IPR001841 -
Bach1g00538 227 SMART ring_2 177 217 IPR001841 -
Bach1g00538 227 SUPERFAMILY RING/U-box 168 224 - -
Bach1g00538 227 MobiDBLite consensus disorder prediction 100 126 - -
Bach1g00538 227 MobiDBLite consensus disorder prediction 72 91 - -
Bach1g00538 227 Pfam RING-H2 zinc finger domain 172 217 IPR024766 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00538 Bach-Chr1 7097024 7100591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00538 1 225 C3H Transcription Factor Family AT5G38895 56.637 2.92e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00538 - - gmx:100777068 409.068