Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00531 ATGGTAGCTGTGATGGGTTTGGAAGCAACACAGAAAGGACAGAGGAAAGGTCCTTGGACACAGGAAGAGGATAAGTTGCTTAGTGAATATGTCACCTTGCACGGGGATTGCAGTTGGAGTTCTGTGGCAAGGCTTGCAGGCTTAAATAGGAGTGGCAAAAGTTGTAGGTTAAGATGGGTGAACTATTTGAAGCCTGGCCTCAAGAAAGGAAAAATAACACCTCAAGAAGAAGGCATCATTTGTGAACTGCATGCTCTACTGGGTAACAAGTGGTCTACAATAGCTAAATACTTGCCAGGAAGAACAGACAACGAGATTAAGAACTATTGGAGAACAAACTTCAAGAACAAAGAAAAAAACCCTTCTAAGAAGTTTGAAAAGCGAAGAGCACAGGGCCTAAAACAGATGAAACAAGAGCAACAACTGGAAAAGCAACTTTGGGAATATGATATGATCAAAAACATCTCATCAGAAGCAGAAGCCAAAACTGAGACAAAACAAACTGAAGCGCTAGAAAAGAAGCAAGAGATGACTTTCATGTGCCCATCTGTAGAGGATCAATGCTTGCCTTTCATGATGTATGATGAAATCACTTCTTCCTGGTATGACATAATGGGATGTGAAGGCATTTTGGCCAACCTTTGGGATCTTGATGAACAACCACAGGGTCATCATGCAGATAATTTAAACCACTTCAGCAATTATGCCATGCTAAACCAAGCTACATTTGGAGGGGATCCCAGTAAGCTGGCCACACAGAATCAGGAAAGAACATTTCGTCTAGGTGAAGATAACCTTTGCTATGAAAAGTGTTTGTTTGGCTGA 825 0.4158 MVAVMGLEATQKGQRKGPWTQEEDKLLSEYVTLHGDCSWSSVARLAGLNRSGKSCRLRWVNYLKPGLKKGKITPQEEGIICELHALLGNKWSTIAKYLPGRTDNEIKNYWRTNFKNKEKNPSKKFEKRRAQGLKQMKQEQQLEKQLWEYDMIKNISSEAEAKTETKQTEALEKKQEMTFMCPSVEDQCLPFMMYDEITSSWYDIMGCEGILANLWDLDEQPQGHHADNLNHFSNYAMLNQATFGGDPSKLATQNQERTFRLGEDNLCYEKCLFG 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00531 274 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
Bach1g00531 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Bach1g00531 274 MobiDBLite consensus disorder prediction 1 20 - -
Bach1g00531 274 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 13 176 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach1g00531 274 SMART sant 68 116 IPR001005 -
Bach1g00531 274 SMART sant 15 65 IPR001005 -
Bach1g00531 274 Gene3D - 7 69 - -
Bach1g00531 274 CDD SANT 73 114 IPR001005 -
Bach1g00531 274 Gene3D - 73 147 - -
Bach1g00531 274 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bach1g00531 274 Coils Coil 123 143 - -
Bach1g00531 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Bach1g00531 274 CDD SANT 18 63 IPR001005 -
Bach1g00531 274 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bach1g00531 274 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bach1g00531 274 Pfam Myb-like DNA-binding domain 69 112 IPR001005 -
Bach1g00531 274 FunFam Myb transcription factor 16 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00531 Bach-Chr1 7026783 7028361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00531 13 219 MYB Transcription Factor Family AT3G30210 50.242 8.98e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g00531 Myb_DNA-binding 9.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00531 K09422 - tcc:18601749 259.225