LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g00479	ATGACTAGCCTCTCCGTATTCATATTCTTAACCCTCCAACACCTGTTCACTATTAGCGTTACCTCCTATAAACCAGTAGAGAATTTCGCAGTCAACTGCGGCTTCTCCGACAACTTATATTTTAATTCCCGAAACTGGACCGGAGACATCAACTCAAAACTGTTCTCTCCCATTGAACCACAAAACCAACACTCAGTCACCGTCCATGCACCTTCCCATTCTACATCAGTCGTTTCAATCCCCTACAGCACTGCCCGCGCATCTCGCTTTGAATTCTCCTACTCCTTTCCGGTTACCGACGGCCAAAAATTCATTCGCCTCCACTTTTTTCCAGCTTTGTACCCCAACTTCGACCGCTCCAACTCCCTCTTCTCCGTCAGAGCAGGCCCTTACACCCTTCTCAAGGATTTCAATGCTTCACTCACTGCAGATAACGACGACAACCCAGAAGAAACCATCACCAGAGAATACTGCATAAACGTAGACCCCGGTCAAAGGCTAAACCTAACCTTCACACCCAGCCCCACGCACCCAGATGCCTATGCTTTTATCAACGGCTTTGAAATCGTGTCCATGCCCACCGATCTCTATTATACTAAACCAGATGACCCTGGGTTAAGCCTAGTCAATCAGATCTCCCAGACGTACCGGATTGACAACAACACTGCTCTCGAGACAGTTTACAGAGTTAGCGTTGGAGGGAGACAGATTCCGCCCAACAACGACACCGGCATGTTCCGGAACTGGGACGGAGATGTCCCCTACGTGGAAGAGGAGCATGACGGAAGTATCGCTGCAGGGTTTGCTTTAAAACTTAAAGACAAAGGCAAAAATTACATTGCACCAGATGATGTATACTTGACGGCAAGGACCTACGGCAAGTATGCGACCTCCAAATACAATGTGACCTGGAATTTTGAAGTGGATTCGGAGTTCTCTTATATGGTGAGGTTACATTTTTGTGAGTTTGAGCAAGAAATTCAAAGATCTGACCAAAGGGTTTTCCAGATTTTCATCGCTGACAATTTGGCAGAACCTCATGCCGATGTGATTAGATGGAGTGGTGGTAATCTTTTTCCATTTTATAAGGACTACGTTGTGCTTAGGTTTAATGAAGCAAGCTTGAAGAAGCTGAACCTTTCAGTTACGTTGCGACCACACCCAAATGAAAAGGTTCGTGAGTACAATGATGTCATCTTGAATGGAATTGAGATTTTCAAATTAAACAACAGTGATGGCAATCTCGGCGGTCCCAACCCCAACCCCAAACAGTCACTAGTGTCGTTGACAGAACCATCAGGAAAATCAAAGAAAACGAAGATAGTTCCCATCTTGGTTGGTGTAGGTTCAGGCGTCGTTTTACTATCTGTCATCGGTTTCTTAGTTTTCCGGAGACTGACTATAGCTGGAAACTCATTGCTGGGGAAGTCAAAGTCAAGTAAGACTCATGAGTCATCTCTACCGTCCGAACTGTGTCGTCACTTTTCAATCGCTGAGATTAAAGCAGCCACCAAAAACTTCGATGAGCTTTTCATTGTTGGTGTTGGAGGGTTTGGTAATGTGTACAAAGGTTACATCAACGATGGTTCTACACCAGTGGCGATCAAACGGCTCAAACCGGGTTCAAAACAAGGGGCCCACGAGTTCCAAACAGAGATTAAGATGCTCTCTCAACTTCGTCACCTTCATTTGGTCTCTTTGATAGGGTATTGTAACGGCGGCGGGGAAATGATTCTTGTCTATGATTACATGGAACGTGGAACCCTGAGTGAGCATCTTTACGGTTCTGATAATCAACGGCTCTCTTGGAAGCAAAGGCTTGAGATTTGCCTCGGTGCCGCACGAGGACTGCAGTATCTTCATACGGATGCGAAGCACACTATCATTCACCGTGACGTGAAGAGCACGAATATTTTGATAGACGAGAAATGGGTGGCGAAAGTTTCGGATTTCGGATTATCAAAGTTCGGACCCACTGAGATGTCTAAGTCTTACATTAGCACAGAAGTGAAGGGGAGTTTCGGGTATTTGGATCCGGAATACTACAAGCGTCAAAGGTTGACTGAGAAATCTGACGTGTACTCATTTGGTGTGGTGTTGTTGGAGGTATTGTGTGGGAGACCACCCGTGCTTCGTACGGTAGACAAGCCGCGTGTAAACTTAGTGGATTGGGTCCGTAAATGCTCAAAGAACGGTGAGATTGATCAGACGGTTGATCGATTTCTAAAAGGAACCATTACCCGTGTGTGTTTAAATAAATTCGTTGAGATGGCACTAGAATGCGTGGCTGATGATGGGAATCAACGGCCATCAATGAACGATTTGGTATGGGGCTTAGAATTTGCATTGCAGCTTCAGGTTACGGAGGTTGGTGGGACCCAGTTTGAGAGGGTGAGTGAGGAAAGAGCCGTCTTGCCCCATTCAGTGAATGCTGCAAACGATGAAGAAAGTGATGAGCAATACTTCACAAATACAGATGGATCAGTGGAGTCAAAGAACAGCAAGGTGACTTTAACAAGTAGTGAAGGTTTGATGTAA	2538	0.4563	MTSLSVFIFLTLQHLFTISVTSYKPVENFAVNCGFSDNLYFNSRNWTGDINSKLFSPIEPQNQHSVTVHAPSHSTSVVSIPYSTARASRFEFSYSFPVTDGQKFIRLHFFPALYPNFDRSNSLFSVRAGPYTLLKDFNASLTADNDDNPEETITREYCINVDPGQRLNLTFTPSPTHPDAYAFINGFEIVSMPTDLYYTKPDDPGLSLVNQISQTYRIDNNTALETVYRVSVGGRQIPPNNDTGMFRNWDGDVPYVEEEHDGSIAAGFALKLKDKGKNYIAPDDVYLTARTYGKYATSKYNVTWNFEVDSEFSYMVRLHFCEFEQEIQRSDQRVFQIFIADNLAEPHADVIRWSGGNLFPFYKDYVVLRFNEASLKKLNLSVTLRPHPNEKVREYNDVILNGIEIFKLNNSDGNLGGPNPNPKQSLVSLTEPSGKSKKTKIVPILVGVGSGVVLLSVIGFLVFRRLTIAGNSLLGKSKSSKTHESSLPSELCRHFSIAEIKAATKNFDELFIVGVGGFGNVYKGYINDGSTPVAIKRLKPGSKQGAHEFQTEIKMLSQLRHLHLVSLIGYCNGGGEMILVYDYMERGTLSEHLYGSDNQRLSWKQRLEICLGAARGLQYLHTDAKHTIIHRDVKSTNILIDEKWVAKVSDFGLSKFGPTEMSKSYISTEVKGSFGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLCGRPPVLRTVDKPRVNLVDWVRKCSKNGEIDQTVDRFLKGTITRVCLNKFVEMALECVADDGNQRPSMNDLVWGLEFALQLQVTEVGGTQFERVSEERAVLPHSVNAANDEESDEQYFTNTDGSVESKNSKVTLTSSEGLM	845

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g00479	845	Pfam	Malectin-like domain	31	407	IPR024788	-
	Bach1g00479	845	Gene3D	-	222	410	-	-
	Bach1g00479	845	Gene3D	-	28	194	-	-
	Bach1g00479	845	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	628	640	IPR008271	GO:0004672\|GO:0006468
	Bach1g00479	845	PANTHER	OS03G0124300 PROTEIN-RELATED	6	469	IPR046957	GO:0004672
	Bach1g00479	845	SUPERFAMILY	Protein kinase-like (PK-like)	492	777	IPR011009	-
	Bach1g00479	845	FunFam	Receptor-like protein kinase FERONIA	479	583	-	-
	Bach1g00479	845	Gene3D	Phosphorylase Kinase; domain 1	468	583	-	-
	Bach1g00479	845	Pfam	Protein tyrosine and serine/threonine kinase	513	776	IPR001245	GO:0004672\|GO:0006468
	Bach1g00479	845	SMART	serkin_6	507	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach1g00479	845	MobiDBLite	consensus disorder prediction	810	845	-	-
	Bach1g00479	845	MobiDBLite	consensus disorder prediction	815	845	-	-
	Bach1g00479	845	Gene3D	Transferase(Phosphotransferase) domain 1	584	794	-	-
	Bach1g00479	845	FunFam	FERONIA receptor-like kinase	28	193	-	-
	Bach1g00479	845	CDD	STKc_IRAK	513	776	-	-
	Bach1g00479	845	FunFam	FERONIA receptor-like kinase	222	409	-	-
	Bach1g00479	845	FunFam	Receptor-like protein kinase FERONIA	584	801	-	-
	Bach1g00479	845	ProSitePatterns	Protein kinases ATP-binding region signature.	513	536	IPR017441	GO:0005524
	Bach1g00479	845	ProSiteProfiles	Protein kinase domain profile.	507	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g00479	Bach-Chr1	5826192	5828729	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g00479	18	786	Receptor kinase-like Gene Family	AT3G51550	51.119	0.0	746

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Bach1g00479		Malectin_like	9.7e-41	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g00479	-		-	qsa:O6P43_009177	936.406