Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00454 ATGGCATTCCTCAATAAAGTGGGGAACCTACTCAAGCGTTCTTCTGTCAAGTACATTAATCAAGAGTTATCTGGATCTACCCCATCAATTTACCATGCAATCAGATCCATGTCATCTGCAAAACTTTTTGTTGGAGGTATTTCGTATAGCACAGATGATACAAGTCTGAAAGAAGCCTTTGCTCGCTATGGGGAGGTGGTTGAAGCAAGGGTTATTTTGGATCGTGAGACTGGTAGATCCAGAGGCTTTGGCTTCATTACTTACACATCAAGTGAGGACGCTTCTAGTGCCATTCAGGAGATGGATGGGCAGGATCTTCATGGTCGGAGGATAAGGGTGAATTATGCCACAGAAAGGTCCCGTCCAGGGTTTGGTGGTGGTGGCGGTTATGGGGGTGGTGGCTATGGTGGTGGTGGTGGTGGTTATGGCAGTGGCGGCTATGGTGGTGGCGGCTATGGTCAGAGTAATTATGGGGGTGGTGATAACTTTGGGAATGCAAGTTATGGTGGTGGGGGCAGCTATGGCGGTAGTAGCATGAACTCCAGTGCAGACCATGGTGTTTCTGCTGGTGCTGGTGAAGGTAATTACCAATTTAATGAAAGTTCTGGTGGATTTGCCAGCAATGAATTCAATAGCAATTCTGGTTTGGGACTTGAAGATGATGGCCGGTTTGGTAGCAAGCAAAATGACGAAATAGACACATATGATGATGAACAGAACCCAACACAAGAAGACAATCTGAGGGAAAACAAGGATGAACCTGATGGTTACGCTCGCACCCAAGGGTAA 789 0.4677 MAFLNKVGNLLKRSSVKYINQELSGSTPSIYHAIRSMSSAKLFVGGISYSTDDTSLKEAFARYGEVVEARVILDRETGRSRGFGFITYTSSEDASSAIQEMDGQDLHGRRIRVNYATERSRPGFGGGGGYGGGGYGGGGGGYGSGGYGGGGYGQSNYGGGDNFGNASYGGGGSYGGSSMNSSADHGVSAGAGEGNYQFNESSGGFASNEFNSNSGLGLEDDGRFGSKQNDEIDTYDDEQNPTQEDNLRENKDEPDGYARTQG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00454 262 MobiDBLite consensus disorder prediction 200 262 - -
Bach1g00454 262 SMART rrm1_1 41 114 IPR000504 GO:0003723
Bach1g00454 262 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Bach1g00454 262 MobiDBLite consensus disorder prediction 200 215 - -
Bach1g00454 262 Gene3D - 32 156 IPR012677 -
Bach1g00454 262 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Bach1g00454 262 SUPERFAMILY RNA-binding domain, RBD 28 150 IPR035979 GO:0003676
Bach1g00454 262 MobiDBLite consensus disorder prediction 241 262 - -
Bach1g00454 262 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 194 - -
Bach1g00454 262 CDD RRM2_NsCP33_like 41 116 - -
Bach1g00454 262 FunFam Glycine-rich RNA-binding protein 3, mitochondrial 12 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00454 Bach-Chr1 5367874 5370019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00454 42 119 Eukaryotic Initiation Factors Gene Family AT1G49760 33.333 9.74e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00454 K07195 - gmx:100799102 643.654