Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00438 TTGGGATCGGCCTTCTCCTGTGCTTTGACTTTCAGCCATGGCAACTGCTAGGACTGTGAAAGATGTTTCGCCTCACGAGTTCGTGAAGGCCTACTCGGCACATCTCAAGCGCTCTGGCAAGATGGAGCTTCCAGAGTGGACGGATCTTGTAAAAACTGCAACATTTAAGGAGCTGGCACCTTATGATCCTGACTGGTATTATGTCAGGGCTGCCTCCATGGCAAGAAAAATATACTTGAGAGGTGGCCTTGGGGTTGGTGCCTTTCGAAGGATCTATGGTGGAAGCAAGAGAAATGGAAGTCGTCCCCCACATTTCTGCAAGAGCAGTGGAGCAATTGCCCGGCATGTCCTTCAACAATTGCAATCCATGAGCATTATTGAGGTTGATCCCAAAGGAGGAAGGAGAATCACTTCTAGTGGTCAAAGGGATCTTGATCAAGTTGCTGGTCGAATTGTTGTTACTCCATGAATGGCATGATACAGAGAACTGATAATCCATTTGCAATTGCTCTTAGGGTTCATTTTTGTTGATTAGATGAATGAGACAGCAAAGAATCTACTTTATTTTTGTTTACTTTTGTTGAACAGAGCAGTCTGCTCAGGGTTTATGTTTAAAAAGTATGTTTCTCCTTTGTTCTGGTTTTGACAGTTTGATTTACATTATTAGTCTCTATTTTATCTGCAATATCTG 691 0.4313 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPEWTDLVKTATFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGAIARHVLQQLQSMSIIEVDPKGGRRITSSGQRDLDQVAGRIVVTP 143
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00438 143 Gene3D - 1 142 IPR036388 -
Bach1g00438 143 FunFam 40S ribosomal protein S19 2 142 - -
Bach1g00438 143 ProSitePatterns Ribosomal protein S19e signature. 90 109 IPR018277 GO:0003735|GO:0005840|GO:0006412
Bach1g00438 143 SUPERFAMILY "Winged helix" DNA-binding domain 6 141 IPR036390 -
Bach1g00438 143 PANTHER 40S RIBOSOMAL PROTEIN S19 2 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
Bach1g00438 143 SMART Ribosomal_S19e_2 6 142 IPR001266 GO:0003735|GO:0005840|GO:0006412
Bach1g00438 143 Pfam Ribosomal protein S19e 6 140 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bach1g00438 Bach-Chr1 5088420 5090115 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00438 1 143 Cytoplasmic Ribosomal Protein Gene Family AT3G02080 83.916 6.97e-93 263
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00438 K02966 - gmx:100305587 274.633