Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00417 ATGGGGTCAAAATTAACAAAGCATGGTGAACCCAAAGTTGAAAACCTAAGTTTACATCATCATATGATCAATTACCTTTCAAGGAGTTTATATATTCGTAACTTGGTATCTAAGCAAAGGAGGAGAATGCGCATTGCTGGTTATGATCTTGACATGTCATATATCACTGATCGAATACTAGCAATGTCATTTCCTGGGGAACGTATGCGAGCAATGTATAGAAATCCACTCTGGCAGGTCAAATCTGTGTTGGACATGAGACATCATGAGCAATATAAGATCTATAATCTGTGTATAGAAGAAAATTATGATCCAGCACACTTTTGCGGTCGTGTGGAGGCATATCCTTTTGATGACAACCACGTGCCATCTCTTGAAATGATGAAGACTTTCTGTGAAAGTGTAGATTTATGGCTATCAAGTGACCCAAAAAATATTGCAGTCATACATTGCATGGCAGGGAAGGGAAGAACTGGCTTAATGGTATGCGCATACCTTGTTTACTGCTCCATGTCAGCAGAGGAGGCTCTTCAATTGTATGCAGAGAGACGAACAACCAATAATGAAGGAGTATCAATACCAAGCCAACGTCGTTATGTGAGGTACTGGGAAAGTGTGCTTTCTTTTCCTAGGGGCATTGGTATTGGACCACCAGATGTGAAATTGCCTCAAACATGTAGCAGAGAATTGCTGCGAGTCCGGCTTTATGACACAGTTAACATTGACACAATCTTCTTTGTTGTCTCAGAGCTGCAGGAGGTTCCTGGTCAGGTCTACCGACCTCCAGTGGAAGTCTCCAGGAGCTGCTGCAGACAGATTAAGAAAGGTTATCAGAGAACCACCAGTCCTCGTTATTTTATCTCTTTTGTTGAAGGTGATGAAGATGGAAAGAATTTTGAATTAGAAGAACCTCATGTTGTTGTACAAATGGACACCGAGAGTCCTGTAATCTACCAAAAGTCCTGTCTAGATCATTATTTTGACAAACCCATACAAGTTACTGGAGATGTGCGTGTCATATTCTACGAGAAAATGATAGGAGGGCGTCTTTTCTACTGTTGTTTTAATACAGCTTTTATTAGAAACAGCTTACTACAGCTCACAGTCAGGGAGTTGGATAAAGTTGGGAAGAAAGGAAGATCAATATGTGGCCCTGCCTTCTGCTTAGAATTGCTGTTTGGCCCTGCCAACAATACGAGACACTCATTTACATTTCCATATAATGGTGTGAGTTTTACTGATGATTTATTCTGA 1254 0.4075 MGSKLTKHGEPKVENLSLHHHMINYLSRSLYIRNLVSKQRRRMRIAGYDLDMSYITDRILAMSFPGERMRAMYRNPLWQVKSVLDMRHHEQYKIYNLCIEENYDPAHFCGRVEAYPFDDNHVPSLEMMKTFCESVDLWLSSDPKNIAVIHCMAGKGRTGLMVCAYLVYCSMSAEEALQLYAERRTTNNEGVSIPSQRRYVRYWESVLSFPRGIGIGPPDVKLPQTCSRELLRVRLYDTVNIDTIFFVVSELQEVPGQVYRPPVEVSRSCCRQIKKGYQRTTSPRYFISFVEGDEDGKNFELEEPHVVVQMDTESPVIYQKSCLDHYFDKPIQVTGDVRVIFYEKMIGGRLFYCCFNTAFIRNSLLQLTVRELDKVGKKGRSICGPAFCLELLFGPANNTRHSFTFPYNGVSFTDDLF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00417 417 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 47 207 IPR029021 -
Bach1g00417 417 SMART PTEN_C2_2 223 395 IPR014020 -
Bach1g00417 417 CDD PTP_PTEN 51 204 IPR045101 GO:0016791
Bach1g00417 417 Pfam C2 domain of PTEN tumour-suppressor protein 319 393 IPR014020 -
Bach1g00417 417 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
Bach1g00417 417 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 30 400 - -
Bach1g00417 417 ProSiteProfiles C2 tensin-type domain profile. 241 396 IPR014020 -
Bach1g00417 417 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN 28 210 - -
Bach1g00417 417 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Bach1g00417 417 Gene3D Protein tyrosine phosphatase superfamily 28 209 IPR029021 -
Bach1g00417 417 Gene3D - 272 399 - -
Bach1g00417 417 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
Bach1g00417 417 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 303 395 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00417 Bach-Chr1 4778711 4783881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00417 1 396 Protein tyrosine phosphatase (PTP) family AT5G39400 67.920 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00417 K01110 - qsa:O6P43_004433 696.041