Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00408 CAAAGGTAGCAACTGTTAGTACCTGGCTCATAGCTTGGCTTGATACGGAAAGCGAGGAGTAGTTGGTACTTGGCCGGCTGTTATCCAGAAATGACGACCAAGAACGGTGCATCCATCACGGCGGCGGCGGCGCCGCGCCCCACCATAACTCTTCCACCGCGGCCTTCCATGGAGGCCTTCTTCACCGGTGGACCTGGCGCTAGCCCTGGTCCGATGACTCTCGTCTCTAGCTTCTTCTCAGACAACTACCCTGATTCTGATTGTCGGTCTTTCTCTCAGTTGCTTGCTGGAGCTATGGCTTCTCCGCTTGCGCTCGGCGTGAGGCCTAGCTTCTATTCGGACAATTCCACCGACAATTATTCCAAAGAAGCGGGTTCTGAGCAAGCGGTGGAGAAGAATTTGGGGTTTAAGCAGAGTAGGCCCATGAATTTAGTGGTTGCTCGTTCGCCATTGTTTACAGTTCCACCTGGGTTAAGCCCTTCTGGGTTGCTTAACTCTCCGGGGTTCTTTTCTCCGCAGAGTCCCTTTGGGATGTCCCACCAGCAGGCTCTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCATTTGCATATGCAAGCAGATTATCAGCCTTCTTCAATGGCAGCTCCAGCTGGACAGCAGCAATCCTTTTCTCAAAATGAAATGCCAGAGCAGCAAGTGGCACCATCTATATCAGATCCTAAAAGTTCCCAACTGGAAACATCAGAGATGTCTAATGCTGATAAGAAATATCAACCCCCTTCTTTGGCCATTGATAAACCTGCAGATGATGGCTACAACTGGCGTAAGTATGGGCAGAAACAGGTTAAGGGGAGTGAGTTTCCACGGAGCTACTACAAGTGTACTCATGTAAATTGCCCTGTCAAGAAAAAGGTTGAGCGTGCACCAGATGGCCACATAACTGAAATAATCTATAAAGGCCAGCATAACCATGAATTGCCTCAGTCAAATAAGCGTGCTAAAGATAATAGCGATTCAAATGGAAATACAAGCATTCAAGTTAAGCCTGAGTCAAACTCACAAGGCATGGGTGGAAATTCAAACAAGTTCAGTGAAACCATTCCTGATCAGTCAGTGCCTGAGAGTGACCAGACCTCCAATCTGAGGGTTTCCAGACTACCTGGATCAAGTGAGATTGAGGAAACAGGTGATGTAGATATAAGGGAAGAAGATGGAGATGATGGTGAACCAAATCCAAAGAGAAGGAACACCGATCTTGGAACTTCTGAAGCATCTTTGTCTCACAAGACTGTCACAGAACCCAAAATCATTGTGCAAACTAGAAGTGAAGTTGATCTTTTAGATGATGGCTACAGGTGGCGCAAGTATGGGCAGAAAGTGGTCAAGGGAAATCCTCATCCAAGGAGCTATTACAAGTGCACTAGTGCAGGATGCAATGTGCGTAAGCATGTTGAGAGAGCTTCAACAGACGCCAAAGCTGTCATAACCACCTATGAGGGGAAGCATAATCATGATGTGCCTACTGCTAGAAATAGCAGCCACAACACAGCTAATAGCAGTTCTATGCCACTAAAGCCACAGAAAGTGGTGCCTGAGAAGCATCCTTTACTTAAGGACATGGATTTCGCAAACAGTGACCAAAGACCAGTTGTTTTACGCTTAAAAGAAGAGCAAATCATAGTGTAA 1674 0.4701 MTTKNGASITAAAAPRPTITLPPRPSMEAFFTGGPGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLALGVRPSFYSDNSTDNYSKEAGSEQAVEKNLGFKQSRPMNLVVARSPLFTVPPGLSPSGLLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSHLHMQADYQPSSMAAPAGQQQSFSQNEMPEQQVAPSISDPKSSQLETSEMSNADKKYQPPSLAIDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHVNCPVKKKVERAPDGHITEIIYKGQHNHELPQSNKRAKDNSDSNGNTSIQVKPESNSQGMGGNSNKFSETIPDQSVPESDQTSNLRVSRLPGSSEIEETGDVDIREEDGDDGEPNPKRRNTDLGTSEASLSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDAKAVITTYEGKHNHDVPTARNSSHNTANSSSMPLKPQKVVPEKHPLLKDMDFANSDQRPVVLRLKEEQIIV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00408 527 Gene3D WRKY domain 227 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 Gene3D WRKY domain 398 474 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 MobiDBLite consensus disorder prediction 475 491 - -
Bach1g00408 527 SMART WRKY_cls 413 472 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 SMART WRKY_cls 234 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 SUPERFAMILY WRKY DNA-binding domain 233 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 MobiDBLite consensus disorder prediction 299 352 - -
Bach1g00408 527 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 135 488 IPR044810 GO:0003700
Bach1g00408 527 MobiDBLite consensus disorder prediction 176 241 - -
Bach1g00408 527 SUPERFAMILY WRKY DNA-binding domain 405 473 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 MobiDBLite consensus disorder prediction 269 396 - -
Bach1g00408 527 MobiDBLite consensus disorder prediction 176 221 - -
Bach1g00408 527 MobiDBLite consensus disorder prediction 269 298 - -
Bach1g00408 527 FunFam WRKY transcription factor 33 400 466 - -
Bach1g00408 527 ProSiteProfiles WRKY domain profile. 408 473 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 FunFam WRKY transcription factor 221 294 - -
Bach1g00408 527 ProSiteProfiles WRKY domain profile. 229 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 MobiDBLite consensus disorder prediction 469 492 - -
Bach1g00408 527 MobiDBLite consensus disorder prediction 1 35 - -
Bach1g00408 527 Pfam WRKY DNA -binding domain 414 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach1g00408 527 Pfam WRKY DNA -binding domain 235 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00408 Bach-Chr1 4711085 4714601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00408 10 525 WRKY Transcription Factor Family AT2G03340 52.336 5.14e-152 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach1g00408 WRKY 4.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00408 - - qsa:O6P43_004445 793.497