Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00404 ATGGCAAGGAAGAGAAAGAGTGTTGAAGCAGTGGAAGAAGGGAGCATGGCATGGGATGAGATGGTGAAAGAAGCAGCGGCTGCTACTGCTGCACTGGGAGGGAGAAGGACCAGAAAGAGATTTGTTGGAGTGAGGCAAAGGCCATCTGGGAGATGGGTAGCTGAGATAAAGGACACAATTCAGAAAATAAGAGTGTGGTTAGGCACTTTTGATACAGCTGAGGAAGCAGCTAGAGCCTATGATGAAGCTGCTTGCTTGCTTCGCGGCGCCAACACAAGAACAAACTTCTGGCCTTGTTCTCAATCATCAACAACTCCAGCTCTTCCCTCTAAGATCACCAATCTCCTCCTTCAAAGGCTTAAAGCAAGGAACAACAGTTCTACTTGCTCTTCTGATTCCTCCTCCAGCTCTCTTCTCATCAACCAGCAGCAGCAAGCAGATCATGCATATGCAAGTGGGCAAGTGTCAACTGATTTCTCGGTTGATCAGTTTGCTGATTTTCTTAATGATACTGAAGATTACAGCACAAGCAACAATGAATTTATCAGTAATAGTGCACAAATTGATCGGATTACAAATAGTTTTGAATCTTGTTTAACTGAAAATGATGACTGCAGGGAAAGGGAAATGGGTTTGGAATATAACTGCAGTAATTTGGCACAAACATCAAGTCCTGACTGCAATTCAGGAGGGGAAAGATCAGAGGTGGACAGTGAAGAAGAAGGCACTGATCAGGGTGTCCTGGATTTTCAGTTTCTGGATAATGTTGCTCCATCATCTTACTATTCTCCTTTCGAGATAGCCGAAGAGATCGAGGAGCCTGTGGACCCAGAGAACTATGTTGATGAGCCTTCAATGCTCAGAGCTGCCATGAAGAGGATGAAATATGAGAGGAAATTCTCAGCTTCCCTCTATGCCTTCAATGGGATAACTGAGTGCTTGAAGTTGAAACTGGGATCGGCAAACTTGAGTGGCAGAGCAATTTCTGATCAACTAACGAGCCTCAAGATGGCATGTAATAAGAACAAATTTGAGGAGAAGGAAGAGAAGAAAGAGGAAGAGAACCCAGAAACACCAACTTCCATGGACTCTTCTTCTTCGTCTTCGTCTTCGTCTTCATCTTCATCTTCATCATCTAGTGTTGATGGAGAACTGTTACTGTGGAATTCACTGGATCTTCCTCCCATATGCTTTGTTAACTGA 1203 0.4406 MARKRKSVEAVEEGSMAWDEMVKEAAAATAALGGRRTRKRFVGVRQRPSGRWVAEIKDTIQKIRVWLGTFDTAEEAARAYDEAACLLRGANTRTNFWPCSQSSTTPALPSKITNLLLQRLKARNNSSTCSSDSSSSSLLINQQQQADHAYASGQVSTDFSVDQFADFLNDTEDYSTSNNEFISNSAQIDRITNSFESCLTENDDCREREMGLEYNCSNLAQTSSPDCNSGGERSEVDSEEEGTDQGVLDFQFLDNVAPSSYYSPFEIAEEIEEPVDPENYVDEPSMLRAAMKRMKYERKFSASLYAFNGITECLKLKLGSANLSGRAISDQLTSLKMACNKNKFEEKEEKKEEENPETPTSMDSSSSSSSSSSSSSSSSSVDGELLLWNSLDLPPICFVN 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00404 400 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Bach1g00404 400 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Bach1g00404 400 FunFam ethylene-responsive transcription factor RAP2-11 39 98 - -
Bach1g00404 400 Coils Coil 335 355 - -
Bach1g00404 400 MobiDBLite consensus disorder prediction 343 381 - -
Bach1g00404 400 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 12 301 - -
Bach1g00404 400 MobiDBLite consensus disorder prediction 223 243 - -
Bach1g00404 400 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Bach1g00404 400 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Bach1g00404 400 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Bach1g00404 400 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Bach1g00404 400 MobiDBLite consensus disorder prediction 343 358 - -
Bach1g00404 400 Pfam AP2 domain 40 89 IPR001471 GO:0003700|GO:0006355
Bach1g00404 400 MobiDBLite consensus disorder prediction 359 381 - -
Bach1g00404 400 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00404 Bach-Chr1 4669866 4671068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00404 38 116 AP2-EREBP Transcription Factor Family AT5G19790 72.152 4.32e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach1g00404 AP2 7.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00404 K09286 - qsa:O6P43_004449 485.337