Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00401 CAAAAAGTAATCAGTAAATCACCTTCTCCACACTTACTTTCTTCTGAATCACCAAGGCTGACCGAGACCCATTGGAGAGACCGCGAGCGCCGACCCGTAATGGCAGCTTGTGTAATCACGGTATCACAGGACGGAAATGGAGACTATCGAACGGTACAGGATGCAATTGATGCTGTTCCACTGGGCAACACTTGTCGAACGGTGATTCGAGTGGCTCCGGGCATTTACAAGCAACCAGTCTACGTGCCCAAGACCAAAAATTTCATCACTCTCGCGGGTCTGTGTCCAGAGGATACTGTGCTTACTTGGAATAACACTGCTGCCAGAATCGAGCACCATCAGGCTGCTAGGTTGATCGGGACTGGGACCTTTGGTTGTGGCAGCACCATAGTGGAAGGAGAGGACTTTATTGCTGAGAATATTACGTTTGAGAATTTCTCCCCTGAGGGTTCAGGGCAAGCAGTAGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTACAACTGTAGGTTCCTTGGATGGCAGGACACACTGTACTTGCATTATGGCAAACAGTATCTAAAAGATTGCTATATTGAAGGAAGTGTGGACTTCATTTTCGGCAATAGCACGGCTCTTTTGGAGCATTGTCATATCCACTGCAAATCTCAAGGCTTTATAACTGCACAGAGCAGAAAATCTTCACAAGAAACAACCGGTTATGTGTTCTTGAGATGCGTTATCACAGGCAATGGAGGCACTTCATACACGTATCTCGGTCGACCCTGGGGACCTTATGGAAGAGTGGTCTTTGCTTACTGTTACATGGATCCATGTATAAAGCATGATGGCTGGGATAACTGGGGAAAAGTTGAGAATGAGAGAAGTTGTTGCTTTTACGAATACAGGTGTTTTGGACCGGGTTGTTCCCCGCCGAAACGAGTAGCATGGGCTAGAGAATTGATGGAGGAAGAAGCAGAGCAGTTCCTCATGCACCAGTTCATTGACCCAGAAGCAAGTAGACCTTGGCTTGCCCAAAGAATGGCCTTGAGGATACCATATTCTGCATAG 1050 0.4714 MAACVITVSQDGNGDYRTVQDAIDAVPLGNTCRTVIRVAPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTAARIEHHQAARLIGTGTFGCGSTIVEGEDFIAENITFENFSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTSYTYLGRPWGPYGRVVFAYCYMDPCIKHDGWDNWGKVENERSCCFYEYRCFGPGCSPPKRVAWARELMEEEAEQFLMHQFIDPEASRPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00401 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Bach1g00401 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 299 - -
Bach1g00401 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Bach1g00401 316 SUPERFAMILY Pectin lyase-like 2 302 IPR011050 -
Bach1g00401 316 FunFam Pectinesterase 2 309 - -
Bach1g00401 316 Gene3D - 2 309 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00401 Bach-Chr1 4634761 4637253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00401 5 309 Carbohydrate Esterase AT5G47500 38.854 4.37e-72 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00401 K01051 - qsa:O6P43_004451 609.372