Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00396 ATGGAGGGATCATTAGGTGTGAGGAAAGGTGCATGGACTAAAGAAGAGGATGATCTTCTTAGAGCTTGTATTCAAAGGTATGGGGAGGGCGGTTGGAACCTCATTCCTCAAAGAGCAGGCTTGAATCGATGCCGGAAAAGTTGCAGACTTCGATGGTTAAACTATCTGAAACCAGAAATCAAGAGGGGAAACTTCGCTGAAGATGAAGTAGATATGATCATAAGGTTGCATAGACTCTTGGGTAACAGATGGACGCTGATTGCTGGAAGACTACCTGGAAGAACAGCAAACGATGTAAAGAACTTCTGGAACACATACATGCGCAAGAAGAGTACCGTAGAAGAAAAGGGAAAACGCAAAGAAGTCTTGAAAACCCACGAAATATTAAAGCCTCAACCTCGGACCTTGTCAAAAAATTCACCTAGCCTGGTAGAGAAGCAAACTGGTGAGTTTCATAACAGTACTGTCGAACAGTGTAGCAGCGCTGAAGTCTGGAACACATACATGCGCAAGAAGAGTACCGTAGAAGAAAAGGAAAAACGCAAAGAAGTCTTGAAAACCCACGAAATATTAAAGCCTCAACCTCGGACCTTGTCAAAAAATTCACCTAGCCTGGTAGAGAAGCAAACTGGTGAGTTTCATAACAGTACTGTCGAACAGTGTAGCAGCGCTGAAGTATACGCAGCCTCACCCCTACAGTTCCCAGACAACTGGTCAGATAACTGGTTGGAATGTTTGTTGGAGGAACTGGCAAGTTGCACATGCGAGGGGAATAGCTCATGCTGCTCATGCACACAAGAGGAAAGCCTCACACTTGATCTATGGGATGAGGAACTCAATATGCAATGA 849 0.4452 MEGSLGVRKGAWTKEEDDLLRACIQRYGEGGWNLIPQRAGLNRCRKSCRLRWLNYLKPEIKRGNFAEDEVDMIIRLHRLLGNRWTLIAGRLPGRTANDVKNFWNTYMRKKSTVEEKGKRKEVLKTHEILKPQPRTLSKNSPSLVEKQTGEFHNSTVEQCSSAEVWNTYMRKKSTVEEKEKRKEVLKTHEILKPQPRTLSKNSPSLVEKQTGEFHNSTVEQCSSAEVYAASPLQFPDNWSDNWLECLLEELASCTCEGNSSCCSCTQEESLTLDLWDEELNMQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00396 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 56 IPR017930 -
Bach1g00396 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Bach1g00396 282 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 199 - -
Bach1g00396 282 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Bach1g00396 282 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Bach1g00396 282 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Bach1g00396 282 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Bach1g00396 282 SMART sant 61 109 IPR001005 -
Bach1g00396 282 SMART sant 8 58 IPR001005 -
Bach1g00396 282 CDD SANT 64 107 IPR001005 -
Bach1g00396 282 Gene3D - 64 135 - -
Bach1g00396 282 CDD SANT 11 56 IPR001005 -
Bach1g00396 282 FunFam Myb transcription factor 9 61 - -
Bach1g00396 282 Gene3D - 9 61 - -
Bach1g00396 282 SUPERFAMILY Homeodomain-like 6 103 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00396 Bach-Chr1 4543546 4545648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00396 2 140 MYB Transcription Factor Family AT1G66370 60.927 3.23e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g00396 Myb_DNA-binding 7.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00396 - K09422 gmx:100780023 229.95