Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00390 ATGGGTCGATCACCATGCTGTGACAAGGTTGGCTTAAAGAAAGGGCCATGGACGCCTGAAGAAGATCAGAAACTCTTAGCTTATATTGACGAACATGGCCATGGGAGCTGGCGTGCCTTGCCATCAAAAGCTGGACTTCAGAGGTGTGGCAAGAGCTGCAGGCTAAGATGGACTAATTATCTTAGACCTGATATTAAGAGGGGAAAGTTTAGCTTGCAAGAAGAGCAGACCATCATTCAACTGCATGCCCTCTTGGGAAACAGGTGGTCGGCTATAGCCACTCACTTGCAAAAGAGAACAGATAATGAGATCAAGAACTACTGGAATACACATCTTAAGAAAAGGTTAGCCAAAATGGGAATTGACCCAGTAACCCACAAGCCCAAGAATGATTCTCTTCTCTCCAGCGACGGTCAATCCAAGAGTGCTGCCAACCTTAGCCACTTGGCTCAGTGGGAGAGTGCTAGGCTTGAAGCTGAAGCAAGACTGGTTAGGGAATCCAAGCTACGTTCACATTCATTGCAGCAGCATCAGCTTGGCAATTCTGGGTTTCCATCTTCATCTTCTGTATTAACTTCACCTCCAGTTCTGAATAAACCAGAGGCACCCCCTATGCCTTCAAGGTCTCTAGATGTACTTAAGGGTTGGAATGTTGGGTGGCTAAGATCTAATGAGGGTAATGGTGGTATGGCTACAGACCTTGAGTCCCCTACATCTACCCTAACTTTCTCTGAGAATGCGCCACCATTGTTGACCAGTGGACTTGGAGAAAACACAATGCCAATGATTGAGTTTGTGGGGACTTCAGGTTCTTCAGAAAGGGTTGTGAAAGAAGAAGGTGAGCATGAGTATCTGCCAGAATACAAAGATGGTACGACAGAGAATTCCATGTCGTTTACGTCTAACCTGCATGACATGACAATTTCCATTGAAGGTACATGGACCTCTGAGTCTCTCAGGACTAGTGGTGCACATGTCCCTATTGGAGATGTTATTGCTGAGGAGGGCTTCACAAATCTTTTGCTTAATGCTAATTCCGACGCCCGAAGTTTGTCCGAGGGAGGCGGAGAGTCTAATAACGGTGAAGCTAGTGGCAATGGTAGTGACTTCTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAATTTAGTGAATTCTTCTCCCTCAGATTCCCCCATGTTCTAA 1188 0.4571 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIDEHGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLQKRTDNEIKNYWNTHLKKRLAKMGIDPVTHKPKNDSLLSSDGQSKSAANLSHLAQWESARLEAEARLVRESKLRSHSLQQHQLGNSGFPSSSSVLTSPPVLNKPEAPPMPSRSLDVLKGWNVGWLRSNEGNGGMATDLESPTSTLTFSENAPPLLTSGLGENTMPMIEFVGTSGSSERVVKEEGEHEYLPEYKDGTTENSMSFTSNLHDMTISIEGTWTSESLRTSGAHVPIGDVIAEEGFTNLLLNANSDARSLSEGGGESNNGEASGNGSDFYEDNKNYWNSILNLVNSSPSDSPMF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00390 395 CDD SANT 69 112 IPR001005 -
Bach1g00390 395 FunFam MYB transcription factor 68 129 - -
Bach1g00390 395 CDD SANT 16 61 IPR001005 -
Bach1g00390 395 Gene3D - 68 142 - -
Bach1g00390 395 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach1g00390 395 MobiDBLite consensus disorder prediction 168 208 - -
Bach1g00390 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach1g00390 395 MobiDBLite consensus disorder prediction 349 368 - -
Bach1g00390 395 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach1g00390 395 MobiDBLite consensus disorder prediction 173 195 - -
Bach1g00390 395 Gene3D - 11 67 - -
Bach1g00390 395 SMART sant 13 63 IPR001005 -
Bach1g00390 395 SMART sant 66 114 IPR001005 -
Bach1g00390 395 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bach1g00390 395 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach1g00390 395 FunFam MYB-related transcription factor 13 66 - -
Bach1g00390 395 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach1g00390 395 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach1g00390 395 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00390 Bach-Chr1 4497624 4499690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00390 1 395 MYB Transcription Factor Family AT3G01140 56.127 6.08e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach1g00390 Myb_DNA-binding 3.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00390 K09422 - qsa:O6P43_009101 591.267