Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00389 ATGGAAAACAATTCTCCGAGACCCAGAAAGGAAGATAAAGAGCTTGAATTGCCACCGGGATTTCGATTCCATCCAACAGATGAAGAGCTTATAACTCAGTATCTCTTGCACAAGGTTCTTGACAGCCACTTCTGCGCTAGAGCCATTGGCGAGGTTGATTTGAACAAGTATGAGCCATGGGATTTGCCTTGGAGAGCTAAAATGGGCGAAAAAGAGTGGTATTTTTTCTGTGTAAGAGACAGAAAATACCCAACTGGATTAAGAACAAACAGAGCTACTGATGCTGGCTACTGGAAAGCTACAGGCAAAGACAGAGAGATATACAAAGGAAAGACACTGGTTGGAATGAAGAAAACTCTGGTTTTCTACAAAGGAAGAGCTCCAAAAGGTGAAAAGACCAACTGGGTCATGCATGAATATAGACTAGAAGGCAAATTCTCTGCTTACAATCTCCCCAAAGCTGCCAAGAATGAGTGGTGTATCTGCAGAGTTTTACAAAAAAATTCCAGTGGAAAGAAAGTTCATATGCCGGGGTTGGCGAGGTTGAGCTCCTTTGAAAAGGAATCTTCTTCTTCTTCATTCTTGCCTCCATTAATGGATTCTTCTCCATACAACAGCGAAACAAAAACCACCGGCGGCGAGTTATCACACATGATCTACTTCTCCGACCCGAGCCCGGCGGCACCGGCACCGGCACCGGAAGCGGAGGATCAGAAGACACAAGACGACGTGGTTGATAGCTTGGATAAGGAAACTCGTATCTTGGCCTCTTCAGCTTCTTCTTCAAACCCCTCTGATATTCCCATTTCCCCTGCCTCATGGAGTTTTCCCAAAACAACCCCAGCAAGTTCCTATCAGTGCTCACAGATGGAAACCCAAATTGGGAATTCCCAGTACCCAGATTGTTTTCTGATTCAAGATCACTCCATGATGAGGATGTTGATTGACAACCAGGGATCCAACACAAAGCAGAATGTGAAAACAGAGTTTTCTGAGGACACAGACTTTGTTGCTGATATATCCTCTGTCATATACAACAATGGAATGATTCAAAGATCATTTGACAATCAAGGATGTTTCTCAGCTGCAGCTGGACCTGTAGACATTGGTTGCCTTTGGAATTAGACTCGAGCTAGCAACAACATAATGTACCTTAAACAAAATATTAGATTCTTGTGCAAAGATTGATGTTTAGGAGAGTTGTGCTTTTCTTTTTTTGATGGACTTGTATTAAGAAAACAAATTATTATTATTG 1255 0.4255 MENNSPRPRKEDKELELPPGFRFHPTDEELITQYLLHKVLDSHFCARAIGEVDLNKYEPWDLPWRAKMGEKEWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDREIYKGKTLVGMKKTLVFYKGRAPKGEKTNWVMHEYRLEGKFSAYNLPKAAKNEWCICRVLQKNSSGKKVHMPGLARLSSFEKESSSSSFLPPLMDSSPYNSETKTTGGELSHMIYFSDPSPAAPAPAPEAEDQKTQDDVVDSLDKETRILASSASSSNPSDIPISPASWSFPKTTPASSYQCSQMETQIGNSQYPDCFLIQDHSMMRMLIDNQGSNTKQNVKTEFSEDTDFVADISSVIYNNGMIQRSFDNQGCFSAAAGPVDIGCLWN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00389 374 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Bach1g00389 374 MobiDBLite consensus disorder prediction 190 215 - -
Bach1g00389 374 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Bach1g00389 374 FunFam NAC domain-containing protein 100-like 26 171 - -
Bach1g00389 374 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Bach1g00389 374 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 264 - -
Bach1g00389 374 SUPERFAMILY NAC domain 14 167 IPR036093 GO:0003677|GO:0006355
Bach1g00389 374 MobiDBLite consensus disorder prediction 190 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00389 Bach-Chr1 4484772 4486355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00389 15 374 NAC Transcription Factor Family AT5G07680 52.078 1.41e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach1g00389 NAM 5.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00389 - - vvi:100250998 456.447