Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00370 ATGGACATAACCCCTGCAACAATCACCACCACTGCTGCTGCAACTACTGGTGCTAAATCCCCAGAACCTGACAGTGAGACTCCGACCCGGATCCAACCCTCTAAGAACTTGTCTTTCTCCAACGGTGTGCTTAAGCGGCACCAGCCCCACCCCCATCACCACCTCCACCACCACCACCACCTGGCGAACCAGTCCGTGGTGGTTACCTACAAAGAATGCTTGAAAAACCATGCAGCAAGCTTAGGAGGCCATGCTTTGGATGGTTGTGGCGAGTTCATGCCTTCCCCAAACGCCACCTCCACCGACCCAACTTCCCTGAAGTGCGCCGCTTGTGGGTGTCACCGGAATTTCCACCGCCGTGAGCCGGAGGACCCAATTCCCACTCCGACAACCCACGTTATCGAGTACCAACCTCACCATCGACACCACCCTCCACCACCGCACGCACATCGAAGCCCCAATTCCGCTTCCCCACCACCGATCTCTTCGTCTTACTACCCGGCATCCGCACCCCACATGCTTCTAGCTCTCTCCGCCGGCGGCATATCGGTTCCCCCGGAAAGCACCGCTGCACCCAGCAACAACGCTCTCGTCTCGCCGGGCACGAATGCTAGAAAGCGGTTCCGCACCAAATTCACTCAAGATCAGAAGGAGAAGATGTGCCAGTTCGCCGAAAGGGTAGGGTGGAAGATGCAGAAGAGGGACGATGATTTGATACACGAGTTCTGCAATGAGGTTGGGGTTGACAGAGGAGTCTTGAAGGTGTGGATGCACAACAACAAGAACACTTTAGCGAAAAAAGACGCGAACGGTATTTCAATTTCCAGTGCAGGTACCACCATGCTCGAACAAGACCCCATCAACAACACCAACCACCACCATGAACCTGCCATCAATGGCGACAACAACGGCAACGGCGCCACCACATCGGACCCAACTCACTACCACCATAGCGATAGTCGAGCAAACCTTGGCACTAATGGGTCATCTTCTTCTTCTTGA 1002 0.5499 MDITPATITTTAAATTGAKSPEPDSETPTRIQPSKNLSFSNGVLKRHQPHPHHHLHHHHHLANQSVVVTYKECLKNHAASLGGHALDGCGEFMPSPNATSTDPTSLKCAACGCHRNFHRREPEDPIPTPTTHVIEYQPHHRHHPPPPHAHRSPNSASPPPISSSYYPASAPHMLLALSAGGISVPPESTAAPSNNALVSPGTNARKRFRTKFTQDQKEKMCQFAERVGWKMQKRDDDLIHEFCNEVGVDRGVLKVWMHNNKNTLAKKDANGISISSAGTTMLEQDPINNTNHHHEPAINGDNNGNGATTSDPTHYHHSDSRANLGTNGSSSSS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00370 333 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 264 - -
Bach1g00370 333 Pfam ZF-HD protein dimerisation region 68 122 IPR006456 -
Bach1g00370 333 MobiDBLite consensus disorder prediction 282 333 - -
Bach1g00370 333 MobiDBLite consensus disorder prediction 136 164 - -
Bach1g00370 333 MobiDBLite consensus disorder prediction 46 60 - -
Bach1g00370 333 SUPERFAMILY Homeodomain-like 197 266 IPR009057 -
Bach1g00370 333 Gene3D - 192 267 - -
Bach1g00370 333 NCBIfam homeobox domain, ZF-HD class 205 262 IPR006455 -
Bach1g00370 333 FunFam Zinc-finger homeodomain protein 2 192 266 - -
Bach1g00370 333 MobiDBLite consensus disorder prediction 1 43 - -
Bach1g00370 333 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 70 121 IPR006456 -
Bach1g00370 333 MobiDBLite consensus disorder prediction 1 60 - -
Bach1g00370 333 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 69 121 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00370 Bach-Chr1 4276513 4277514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00370 1 261 ZF-HD Transcription Factor Family AT5G15210 52.852 7.52e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bach1g00370 ZF-HD_dimer 1.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00370 - - qsa:O6P43_009085 380.178