Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00340 ATGAGTGACCATTATGGGCTGCCGGATCTACGGCATCTCATATCTGGAAGAACCCATTTACGGACAAACCCGCTTCTCCAAGAGCCGCTTTCTATTCACTGCAGCTTGGGTTCTTCGACTGCTCCTCCACCCAACAGCTACGAACACGTCATAGCTGGAGACGTTTTCTCTCGTGGGTTTGCTCAGTTTCCTCTCCATGATTATTCCTCTAGCGTTAACCCCACCAACGCCACCACTATTAGCACTGCTTCTGATGCATTTTGCAGCATAGAGGCTGCAGAAAAGGGGTGGCTTGGATTTGATGCTGGCCTAAACAACAGGTGGCCAAGACAAGAGACTCTTTCCCTTCTAGAGATCAGATCCCGTCTTGATTCCAAGTTCAGAGAGACCAATCAGAAAGGACCATTATGGAATGAAGTTTCTAGGATAATGGGTGAGGAATATGGATACCAAAGAAGTGGAAAGAAATGCAAAGAGAAGTTTGAGAATTTGTATAAGTATTACAAGAAGACCAAGGAAGGTAAAGCTGGTAGACAAGATGGGAAGCACTATAGATTCTTTCGCCAGCTTGAAGCAATATGTGGGGAGACAAGCAGCACTCATGCTGCTTCAACTTCATCAGAAACCTTAACCCAGTTTAATCATGGTAGAAACACAAACACTATTATTCCTTTTGATCAAACTCCAAGCATCACTATCAACCAAGACAGTGACGCTCTCCGTAACCTTAAATGCTCCGAGAGCCTTAGCTTCTCGAACTCATCTGAATTCGAGACATCCTCGTCTGAGAACAACGACGAGGATCTCTCAGCCATTGCCTATATGATGAAACAGTCAACGAATCATGAGAAGCAGAAGGGGCTTGACCAGAGACAAGTTCAAGGAAGGGGAGGGAGAAGATCAAGCTGGAAAGCTAAGGTGGAGGAGCTCGTTGACACCCACATGAGGAAGCTAATAGAGACCCAAGATGCTTGGATGGAGAAGATGTTGAGTGTCGTTGAACACAGAGAACAAGAAATGGCCTCTAAAGAGGAAGAAAGGAAGAAGAGGGAATCAATAAGGTTTGATAGAGAAGTGCATGAATTCTGGGCTAAAGAGAGAGCTTGGGTTGAAGCAAGAGATGCTGCATTAATGGAGGTCGTGAAGAAACATATGGGGAAAGGATCAGTTGAAGCATTGCCATTAGCTGAACCCAAGAATATTGAGAACAAGAACCACGAGGATCAGTATCCTTCTGGTAATAATAGGTGGACAGAATTGGAAATTTCGAATTTGATACAGCTGAAGAATGGCTTTGAGATGAGATTCCAAGAAAGTGGGTATGTAGAGAACGGCGTCGTTTGGGATGAAATAGCAGCAAAAATGGCTTGTTTAGGCTTTGATAGGAGTGCCAACGAGTGCAAGCAGATATGGGATGAGATCAGCATCTCTCTAAGCAAAACCAGGCCTTTGAGTGTGGGACTTCACCTGGCGGACAATGACCTTTCACGTTCAAGTTCTAGCGCTGCAGGCACCAGAGGTTATGCATGA 1530 0.451 MSDHYGLPDLRHLISGRTHLRTNPLLQEPLSIHCSLGSSTAPPPNSYEHVIAGDVFSRGFAQFPLHDYSSSVNPTNATTISTASDAFCSIEAAEKGWLGFDAGLNNRWPRQETLSLLEIRSRLDSKFRETNQKGPLWNEVSRIMGEEYGYQRSGKKCKEKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEAICGETSSTHAASTSSETLTQFNHGRNTNTIIPFDQTPSITINQDSDALRNLKCSESLSFSNSSEFETSSSENNDEDLSAIAYMMKQSTNHEKQKGLDQRQVQGRGGRRSSWKAKVEELVDTHMRKLIETQDAWMEKMLSVVEHREQEMASKEEERKKRESIRFDREVHEFWAKERAWVEARDAALMEVVKKHMGKGSVEALPLAEPKNIENKNHEDQYPSGNNRWTELEISNLIQLKNGFEMRFQESGYVENGVVWDEIAAKMACLGFDRSANECKQIWDEISISLSKTRPLSVGLHLADNDLSRSSSSAAGTRGYA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00340 509 FunFam trihelix transcription factor PTL-like 108 170 - -
Bach1g00340 509 CDD GT1 106 172 - -
Bach1g00340 509 ProSiteProfiles Myb-like domain profile. 106 165 IPR001005 -
Bach1g00340 509 ProSiteProfiles Myb-like domain profile. 415 475 IPR001005 -
Bach1g00340 509 Coils Coil 326 346 - -
Bach1g00340 509 Gene3D - 108 170 - -
Bach1g00340 509 Gene3D - 417 479 - -
Bach1g00340 509 Pfam Myb/SANT-like DNA-binding domain 106 193 IPR044822 -
Bach1g00340 509 Pfam Myb/SANT-like DNA-binding domain 415 475 IPR044822 -
Bach1g00340 509 CDD GT1 415 482 - -
Bach1g00340 509 MobiDBLite consensus disorder prediction 279 304 - -
Bach1g00340 509 PANTHER FI21293P1 73 481 - -
Bach1g00340 509 SMART sant 104 167 IPR001005 -
Bach1g00340 509 SMART sant 413 477 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00340 Bach-Chr1 3953796 3956311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00340 107 482 Trihelix Transcription Factor Family AT5G03680 43.358 7.41e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bach1g00340 Myb_DNA-bind_4 4.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00340 - - gmx:100787750 546.969