Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00320 GCGCTCTCTTTGTCGGCACCAAACACGTCTCTAGGGTCACCTTCTCCTCGGCATTCGGGCTCTCTCTCCTCTCTCAAGGAATTGATTCGAGCATCTCCCCTTCTAAGTTAAATCGCAGGACAAACAGATTTCAGCCCCACCCACCGGTTCGCATCTCCTGCCATTCACAGGCCACGGTTCCGTTTTTCCTCCGGGGAGTTGTTGCGTTGTTTTTGGGCTTTCTATTGCTTTTACTTGTAAGCTTGCAAGATGGGTGAGAAACAAGAGAATGACACTCTTGTGAAGGTGAAGCCTTCGAGTGAACAGGATATTTCTGATGAACTAGAAGGGAGAATAAAGAAGTACCTCAGAGGAGAAGGTGCTAATTTGGAGAAATTGCAAGATAGAAAGCTGAAGGGTCAACTTGCTGTTCGGGAAGACTTATATGGAAAGTCTGCAAAGGCTGCTGCCAAGGCTGAGAAGTGGCTTATGCCCAGTGAGGCAGGTTATTTGGAGGCTGATGGCATAGAGAAGACATGGAGGATCAAACAAACGGATCTAGTTCATGCAGTAGATATATTAAGCTCAAGGAACCAATACGACATTGTTTTGCCAGAACTTGGTCCATACATTCTGGATTTTACATTGAATGGCCGGTATATGGTTATTGGAGGACGCAAGGGCCATCTAGGAATTGTGGACATGATGAAATTGAGCCTAATCAAAGAGTTTCAGGTTAGAGAGACGGTGCGTGATGTGGTATTCTTGCACAATGAGTTGTTTTTTGCAGCTGCCCAGAAAAAGTATTCTTACATATATAACCGTGATGGCACAGAGCTTCATTGCCTTAAGGAACATGGTGAAGTGTTGAGGCTTCAGTTTCTGAAAAATCACTTTCTTTTGGCTTCAATAAACAAATTTGGGCAGCTTCATTATCAGGACGTTACAACGGGTGTTATGGCTGGTAACTTTCGTACTGGCTTAGGAAGGACTAATGTGATGCAAGTGAACCCTTTCAATGGGGTCGTTGCTTTGGGTCATGCAGCTGGTACAGTTACAATGTGGAAGCCAACCAGCTCTTCTCCCCTTGTCAAGATGCTGTGTCATCATGGGCCTGTCACAGCACTGGCATTTCACTCAAATGGCCACTTAATGGCCACTGCAGGAAAAGATAAAAAAATTAAGCTTTGGGACTTGAGAAAATTCGAGGTTCTTCAGACATTACCAGGCCATGCAAACACACTGGATTTTAGTCAGAAAGGCTTGCTGGCTTCTGGTACTGGATCATTTATACAGGTTCTGAATGCTTCTTCTGGTACTCAGACCTATTCTAAGTATATGACTCATTCCATGGCGAAGGGTTACCAGGTAGGGAAGTTATTATTTCGACCATATGAAGATGTTCTTGGTATAGGACACTCCATGGGTTGGTCTAGTATTCTTATTCCAGGATCAGGTGAACCCAACTTCGACTCATGGGTGGCAAACCCATTTGAAACATCTAAACAGAGGAGAGAAAAGGAAGTCCACTCTCTTCTTGATAAGCTTCCACCAGAAACAATCATGCTGGATCCCAGCAAGATTGGTACAGTGAAACGGACAAAGAACGAACAACCTTCAAAGCAAGAGAGGGAGGCTGAGATGGAGGCAGCCCTTGAAGCATCGAAGGGCATCAAGCTGAAGAAGAAGACAAAAGGAAGAAATAAGCCAAGTAAGATGGCGCAGAAAAAGCAGGATATGATTGCAAAAGTCAAGAGACCTTACTTGGATCAAAAAATGAAGGAGAAAGAACAGATTTCCAGGAAGAAGCAGAAAGTTAGTGAGGAAATTGAATTGCCAAAATCTTTGCAGCGATTTGCTAGTAAGAAAGCAGCATCATGA 1860 0.4409 MGEKQENDTLVKVKPSSEQDISDELEGRIKKYLRGEGANLEKLQDRKLKGQLAVREDLYGKSAKAAAKAEKWLMPSEAGYLEADGIEKTWRIKQTDLVHAVDILSSRNQYDIVLPELGPYILDFTLNGRYMVIGGRKGHLGIVDMMKLSLIKEFQVRETVRDVVFLHNELFFAAAQKKYSYIYNRDGTELHCLKEHGEVLRLQFLKNHFLLASINKFGQLHYQDVTTGVMAGNFRTGLGRTNVMQVNPFNGVVALGHAAGTVTMWKPTSSSPLVKMLCHHGPVTALAFHSNGHLMATAGKDKKIKLWDLRKFEVLQTLPGHANTLDFSQKGLLASGTGSFIQVLNASSGTQTYSKYMTHSMAKGYQVGKLLFRPYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIMLDPSKIGTVKRTKNEQPSKQEREAEMEAALEASKGIKLKKKTKGRNKPSKMAQKKQDMIAKVKRPYLDQKMKEKEQISRKKQKVSEEIELPKSLQRFASKKAAS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00320 536 PANTHER WD-REPEAT PROTEIN BING4 11 530 IPR040315 -
Bach1g00320 536 SMART BING4CT_2 355 435 IPR012952 -
Bach1g00320 536 Coils Coil 499 519 - -
Bach1g00320 536 SUPERFAMILY WD40 repeat-like 118 383 IPR036322 GO:0005515
Bach1g00320 536 MobiDBLite consensus disorder prediction 1 20 - -
Bach1g00320 536 Pfam WD domain, G-beta repeat 277 308 IPR001680 GO:0005515
Bach1g00320 536 SMART WD40_4 269 308 IPR001680 GO:0005515
Bach1g00320 536 SMART WD40_4 311 345 IPR001680 GO:0005515
Bach1g00320 536 SMART WD40_4 227 266 IPR001680 GO:0005515
Bach1g00320 536 SMART WD40_4 147 184 IPR001680 GO:0005515
Bach1g00320 536 ProSiteProfiles Trp-Asp (WD) repeats profile. 276 317 IPR001680 GO:0005515
Bach1g00320 536 FunFam U3 small nucleolar RNA-associated protein 7 108 390 - -
Bach1g00320 536 MobiDBLite consensus disorder prediction 468 518 - -
Bach1g00320 536 MobiDBLite consensus disorder prediction 482 518 - -
Bach1g00320 536 ProSitePatterns Trp-Asp (WD) repeats signature. 295 309 IPR019775 -
Bach1g00320 536 Pfam BING4CT (NUC141) domain 356 434 IPR012952 -
Bach1g00320 536 Gene3D - 118 384 IPR015943 GO:0005515
Bach1g00320 536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 276 310 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00320 169 348 U-box Gene Family AT1G04510 27.083 2.23e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00320 K14768 - gmx:100786818 872.848