LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g00319	TTTTCAGGTTTCCATTATGAACTGTCTTCAGAATCTTTCTCGATCCTCTGCTTTTCCCTTTCAAAGTATCAGATGCAACCAAAGGAAGCCTCCTTCGTCAGCTAATTCAGTGGGAATTGTCAATCCTTCTAATCAAAATCGAAGTATAACAGTGAAGTCTGCTTCTGGTTCTATGCCCAGTGCAGAGATGAGTAGTGCCAATATGAAGGAGGAGAAGTCTGATACGTATAGTCATAACATGACTGAAGCCATGGGTGCTGTCTTGACCTATAGGCATGAATTGGGAATGAACTACAACTTCATCCGTCCAGACTTAATTGTTGGGTCATGCTTACAGACTCCTGAAGATGTTGACAAGCTCCGCAAAATAGGTGTAAAGACAATATTTTGCTTGCAACAAGACCCTGATCTAGAATATTTTGGAGTTGATATCAATGCCATACGAGAGTATGCAAAGGCATGCAATGACATTCAACACTTGCGCGCTCAAGTAAGGGACTTTGATGCATTTGATCTACGGATGCGGCTTCAAGCTGTAGTTAGCAAATTATTCAAGGCAATAAATCGCAATGGGGGTGTGACATATATACATTGCACTGCTGGAATGGGAAGAGCTCCAGCTGTTGCGTTAGCATATATGTTTTGGGTTCAGGGTTATAAACTTAATGAAGCTCATAGACTGCTTCAGAGCAAACGGTCAAGTTTCCCAAAATTGGATGCCATAAAAAGTGCGACAGCTGATATTCTTACAGGTAAAAAGCTTGTTACTTTGAGATGGAAAGGCAATAAATGCACGACAGTGGAAATATCTGGACTTGATATTGGATGGGGCCAGAGAATGCCTCTGAGTTTTGATGACGAACAAGGGGCGTGGCTTCTCAAGAGGGAATTGCTTGAAGGAAGCTATGAGTACAAGTACATTGTTGATGGGAAATGGACTTGCAATAACGATGAACGCGTGACCTCTCCGAACAAAGATGGCCATGTCAATAATTTAATTCAGGTCCTCGAAGATCCGAGCAGTATTCGTGCTTCCCTCAGGAAAAGAGTGACTGGTGATGATCCTGATCTCAAAAAAGAAGAACGGCTGACAATAAGACAGCTTCTTGAAGATTGCCCTGATGACGAACAATAAACTAGTAATGCACCTAGTTGTTTATATGTAAATAATAATTGGATATATATATATATACGTATAAATATAATAATAAACTAGGAATCTCTCATATGAGCTGTCTGCCATAGATTTGATACTGTTGGGACCCAGCAGTTCAGTTTCAATTACTGAACAATGTTATTCCCA	1303	0.4052	MNCLQNLSRSSAFPFQSIRCNQRKPPSSANSVGIVNPSNQNRSITVKSASGSMPSAEMSSANMKEEKSDTYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDINAIREYAKACNDIQHLRAQVRDFDAFDLRMRLQAVVSKLFKAINRNGGVTYIHCTAGMGRAPAVALAYMFWVQGYKLNEAHRLLQSKRSSFPKLDAIKSATADILTGKKLVTLRWKGNKCTTVEISGLDIGWGQRMPLSFDDEQGAWLLKRELLEGSYEYKYIVDGKWTCNNDERVTSPNKDGHVNNLIQVLEDPSSIRASLRKRVTGDDPDLKKEERLTIRQLLEDCPDDEQ	372

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g00319	372	MobiDBLite	consensus disorder prediction	22	61	-	-
	Bach1g00319	372	ProSiteProfiles	Tyrosine specific protein phosphatases domain profile.	169	227	IPR000387	GO:0016311\|GO:0016791
	Bach1g00319	372	FunFam	Phosphoglucan phosphatase DSP4, chloroplastic	85	262	-	-
	Bach1g00319	372	SMART	dsp_5	92	242	IPR020422	GO:0006470\|GO:0008138
	Bach1g00319	372	CDD	E_set_AMPKbeta_like_N	250	330	-	-
	Bach1g00319	372	FunFam	Phosphoglucan phosphatase DSP4, chloroplastic	245	335	-	-
	Bach1g00319	372	SUPERFAMILY	E set domains	247	330	IPR014756	-
	Bach1g00319	372	CDD	DSP_laforin-like	91	238	IPR045204	GO:0019203
	Bach1g00319	372	Pfam	Glycogen recognition site of AMP-activated protein kinase	250	333	IPR032640	-
	Bach1g00319	372	SUPERFAMILY	(Phosphotyrosine protein) phosphatases II	89	233	IPR029021	-
	Bach1g00319	372	ProSiteProfiles	Dual specificity protein phosphatase domain profile.	92	249	IPR020422	GO:0006470\|GO:0008138
	Bach1g00319	372	Gene3D	Protein tyrosine phosphatase superfamily	85	362	IPR029021	-
	Bach1g00319	372	PANTHER	DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN	3	370	-	-
	Bach1g00319	372	Pfam	Dual specificity phosphatase, catalytic domain	135	230	IPR000340	GO:0008138\|GO:0016311
	Bach1g00319	372	Gene3D	Immunoglobulins	247	335	IPR013783	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g00319	Bach-Chr1	3712440	3721253	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g00319	91	371	Protein tyrosine phosphatase (PTP) family	AT3G52180	69.258	2.15e-148	419

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g00319	-		-	gmx:100804010	588.956