Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00307 ATGTCAACTGAGGAAGCTTGGCCTGCCACTGTTGAAGTATCTGGCAAATCTCTACCACCATTTGATAAGAGAAGTGGATACGATTCGAAAACAGGCATCTATCACTCTCTTGTAAGTCTTGGTCCCCAGCTTGAAATCCCAACGAGGCCTGACCTTGACACAAGTAGTTTTGTGCTATCACAGTTTCCTCCAGCGCACCTTGCTGAGACAACAATTGCCTTCATTGATTCAAGTACTAATCGTCATCTAAGCTATGGCGAGCTTCGCCGCTCTATTTTCTCCCTTGCATCAAGTTTGTACCATGGACTTGGGGTCAGGAAAGGGGATGTGGTGTTTGTACTGTCACCAAACTCACTCTTGTACCCAACAATATGCCTAGCCGTGATATCAATTGGAGCAATTCTCACCACTGCGAACCCCCTTAATAGCCCCTCAGAAATTGCTAAGCAAGTACGTGATTCAGGTGCTAAACTAGCCATCTCAACACCAGAGGAGCTACACAAGTTGACCCCAACTGGATTGCTTACAATCCTCACTTGTTCTTCATCTGATGGTGATGAACCTATGTTATCTATTGAAGAGTTAATACAAGGCTGCTCTAACCCAATAGAGTTGCCTCAATCTCATGTGGCCCAATCGGACACTGCAGCTATACTTTACTCTTCAGGCACCACTGGGATAAGCAAAGGTGTAGTTTTGACTCACGCAAATCTTATTTCTATAATAAGATTACTCCAATGGGCTGTAGATGTATCTGCATCACAAGATGATGTCTTCTTAAGCTTCATACCTATGTTCCACATTTATGGACTCGCTTTCTTTGGGTTAGGCTTGTTGTGCATGGGAGTAACAAGTGTAGTAATGCAGAAATTTGATTTCACAACTATGCTTGCTGCAATTGAGAAGCACAAAGTGAATAACATACCAGCTGTGCCTCCGGTGATCCTTGCAATGGCAAAACATGCAAGCAAAGCTGGGTATGATTTGTCCAGCCTGAGAAGGGCTGGTTCAGGTGCTGCACCTTTGAGTAAGGAAGTGGCAAGGGAGTTCAGGCAGAGGTTTCCTTGGGTTGAGCTAAGGCAAGGCTATGGACTAACAGAAAGCTGTGGTGGAGCAACTTTTTCTGCATTAAATAAAGATGCTAAGACAAGGCCAGACTCATGTGGGAGGCTACTTCCAAGATTTTATGCGAAAGTGGTGGACACTGAAACAGGAAAACCTTTACCTCCTCTTATAGAAGGAGAATTATGGCTGAAAAGTCCGACTATTATGAAAGAATATTTGGGAAATTTGGAGGCTACGACTTCTACAGTTGACTCAGAGGGATGGTTGATGACAGGTGATCTTGGCTATATTGATGAGGATGGATTTGTCTACATAGTTGAACGAATTAAGGAGCTGATCAAGCACAATGGGTATCAGGTAGCCCCTGCAGAACTGGAATCTGTATTGCTCAGTCATCCAATGATTCTTGATGCTGCTGTTATCCCGGTTGAAGATAAAGAAACTGGACAGATACCAATGGCATATGTGGTGAGAGCAGCAGGTTCTGAGCTCACAGAAGACCAAGTTATTCAATTTGTTTCCAGCCAGGTAGCCCCGTATAAAAAAGTTAGAAGGGTAAGTTTCATTGACACCATTCCAAAGTCTGCAGCAGGCAAAATCTTGCGCAAGGATCTTGTTTCTCAAACCCAAAATCAACTTGTTTCCAAATTGTGA 1719 0.4369 MSTEEAWPATVEVSGKSLPPFDKRSGYDSKTGIYHSLVSLGPQLEIPTRPDLDTSSFVLSQFPPAHLAETTIAFIDSSTNRHLSYGELRRSIFSLASSLYHGLGVRKGDVVFVLSPNSLLYPTICLAVISIGAILTTANPLNSPSEIAKQVRDSGAKLAISTPEELHKLTPTGLLTILTCSSSDGDEPMLSIEELIQGCSNPIELPQSHVAQSDTAAILYSSGTTGISKGVVLTHANLISIIRLLQWAVDVSASQDDVFLSFIPMFHIYGLAFFGLGLLCMGVTSVVMQKFDFTTMLAAIEKHKVNNIPAVPPVILAMAKHASKAGYDLSSLRRAGSGAAPLSKEVAREFRQRFPWVELRQGYGLTESCGGATFSALNKDAKTRPDSCGRLLPRFYAKVVDTETGKPLPPLIEGELWLKSPTIMKEYLGNLEATTSTVDSEGWLMTGDLGYIDEDGFVYIVERIKELIKHNGYQVAPAELESVLLSHPMILDAAVIPVEDKETGQIPMAYVVRAAGSELTEDQVIQFVSSQVAPYKKVRRVSFIDTIPKSAAGKILRKDLVSQTQNQLVSKL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00307 572 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 562 - -
Bach1g00307 572 FunFam Long-chain-fatty-acid--CoA ligase FadD 43 465 - -
Bach1g00307 572 SUPERFAMILY Acetyl-CoA synthetase-like 70 567 - -
Bach1g00307 572 Gene3D - 466 570 IPR045851 -
Bach1g00307 572 FunFam 4-coumarate--CoA ligase 2 466 567 - -
Bach1g00307 572 CDD 4CL 46 560 - -
Bach1g00307 572 Gene3D - 42 465 IPR042099 -
Bach1g00307 572 Pfam AMP-binding enzyme C-terminal domain 479 554 IPR025110 -
Bach1g00307 572 ProSitePatterns Putative AMP-binding domain signature. 218 229 IPR020845 -
Bach1g00307 572 Pfam AMP-binding enzyme 71 469 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00307 Bach-Chr1 3605502 3607619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00307 22 568 Monolignol Biosynthesis Gene Families AT1G20500 44.982 1.11e-159 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00307 K10526 - gmx:100783104 877.47