Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00302 ATGGAAGCTGCAGAAGAGCTTGCTTCAGGGTCAAAAGATCAAACCCAGATTGTCAAAGGGAAGAGAACCAAAAGGGTAAGACCACAATCCCCTATCCCCTTCTCAATTACAGCCAATTCCTCCAACCAAGGTCAAGCTGTGGCTAAAGATGATTCCAACAATGGTGATAAAGATGACAATGATATCTACTACAATAACAGCAGCTCCCCCACCACGTCCTCTACTCGAAACCGGGATAGCACAGAAGAGGAAGAGGACATGGACATAGCCAATTGTCTGATCCTTCTAGCTCAAGGCCATTCCCAGGAATCTCCAGGACATGCTGAGGAAGATGGTGGCTTGAATTATACCAAGTATAGCAGTAGAAGATTCATGGAAGCTGCTTCTTTGGGCTCTGGGAAAGCAGGGTTTTTTGTTTATGAATGCAAGACGTGTAACAGAACATTCCCTTCATTTCAAGCACTTGGAGGACACAGGGCAAGTCACAAGAAGCCTAAGGCCTTGGCTGCTTTAATGGCCATTAATAATGACAAGAAGCAACTCTTGTTCTCATCAGATGAAAATGAATTCCAATTCAAGAACAACAATGGCAGCAACCCTTTTTCTCTTCAATTGAATAGTAGAGGGAATTTGTATAGCAGCAGCAACAACAAGCCCAAGGTTCATGAGTGTTCTGTTTGTGGGGCTGAATTTACATCTGGGCAAGCTCTGGGTGGTCATATGAGGAGGCATAGGGCAACCGTTGGGGCCAATACGACGTTGTCTTTGACCCCAATGCCTTTGGAACCAGAAGAACAACAACCCAGAAAGCGAAGGAACATTTTGTCTTTGGATTTAGATCTCAATCTTCCAGCACCAGAAGATGATCAAACAGAATCCAAGTTTTCCTTTGCATCCAAGCAACAGCAACAACAGCAGCAGCAGCAACAACAACAAAAGCACCAAGCAAATCTTGTCTTCTCCGCACCGGCTTTGGTGGATTGTCAATACTGA 993 0.4471 MEAAEELASGSKDQTQIVKGKRTKRVRPQSPIPFSITANSSNQGQAVAKDDSNNGDKDDNDIYYNNSSSPTTSSTRNRDSTEEEEDMDIANCLILLAQGHSQESPGHAEEDGGLNYTKYSSRRFMEAASLGSGKAGFFVYECKTCNRTFPSFQALGGHRASHKKPKALAALMAINNDKKQLLFSSDENEFQFKNNNGSNPFSLQLNSRGNLYSSSNNKPKVHECSVCGAEFTSGQALGGHMRRHRATVGANTTLSLTPMPLEPEEQQPRKRRNILSLDLDLNLPAPEDDQTESKFSFASKQQQQQQQQQQQQKHQANLVFSAPALVDCQY 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00302 330 PANTHER ZINC FINGER PROTEIN ZAT5 68 308 - -
Bach1g00302 330 ProSiteProfiles Zinc finger C2H2 type domain profile. 140 167 IPR013087 -
Bach1g00302 330 MobiDBLite consensus disorder prediction 250 269 - -
Bach1g00302 330 ProSitePatterns Zinc finger C2H2 type domain signature. 142 162 IPR013087 -
Bach1g00302 330 ProSiteProfiles Zinc finger C2H2 type domain profile. 222 244 IPR013087 -
Bach1g00302 330 ProSitePatterns Zinc finger C2H2 type domain signature. 224 244 IPR013087 -
Bach1g00302 330 MobiDBLite consensus disorder prediction 295 315 - -
Bach1g00302 330 MobiDBLite consensus disorder prediction 59 76 - -
Bach1g00302 330 MobiDBLite consensus disorder prediction 1 85 - -
Bach1g00302 330 SMART c2h2final6 222 244 IPR013087 -
Bach1g00302 330 SMART c2h2final6 140 162 IPR013087 -
Bach1g00302 330 Pfam C2H2-type zinc finger 139 165 - -
Bach1g00302 330 Pfam C2H2-type zinc finger 221 246 - -
Bach1g00302 330 MobiDBLite consensus disorder prediction 282 315 - -
Bach1g00302 330 Gene3D Classic Zinc Finger 138 244 - -
Bach1g00302 330 MobiDBLite consensus disorder prediction 30 50 - -
Bach1g00302 330 SUPERFAMILY beta-beta-alpha zinc fingers 139 244 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00302 Bach-Chr1 3565570 3566562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00302 1 330 C2H2 Transcription Factor Family AT5G04390 45.767 1.00e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach1g00302 zf-C2H2_6 7e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00302 - - lja:Lj5g3v1698890.1 431.024