Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00292 ATGAATCTTTCTATAAATGGTCAGTCTCAGGTGCCTCCAGGGTTCAGATTTCATCCTACAGAAGAAGAGCTTCTGCAATACTACCTGAGGAAGAAAGTGGCTTATGAAAAGATAGACCTAGATGTGATTCGTGAAGTTGACCTCAACAAGCTTGAGCCCTGGGATATTCAAGAGAAGTGCAAAATAGGGTCAACCCCTCAGAACGACTGGTATTTCTTCAGTCACAAGGACAAAAAGTATCCAACTGGAACCAGAACGAATAGGGCAACAGCAGCAGGATTCTGGAAGGCCACTGGTAGGGATAAGATCATCTACAGCGGGCTTAGAAGAATTGGGTTGAGGAAGACACTAGTCTTCTACAAGGGTCGGGCTCCCCATGGACAAAAATCTGATTGGATCATGCATGAGTATAGATTAGAGGACAACACCCGTGACTCAGTTCAGGTTACGGGTCCGGCAGGAGAGTCGTTGCAGGAAGAAGGATGGGTGGTCTGTCGGGTATTCAAGAAAAAGAACTACCAAAAAAACATAGACAGTCCCAAGACCTCGTCCACCTCCATCTCCATGAACTCAGACACCCAACAAATACTAGGTTCAGGAACTGATCATAGGATTCTGGACCAGATTCTCTCCTACATGGGAACCACGAGTTGCAAGATGGAAAACGAGTCGTTTGGCAAATTCAACCCTATCAATGTCTCTGACGACGACGTTTCATACAGCAATAACAGATTTATCCATCTTCCCAGACTGGAAAGCCCGAGAATGAATAACGATTCATCAGCTGGACTGCATTTGGAGCATGAATCTAGCTTAGGAGCCGGTTGTGGCTATGATCAATCAGTTGTTGATATTTTTACAGAAACTGAACCTTGTGAAGATCATGAAGTCTCCGAGACAAAGCTGGAAAACTGGGTTGCCCTTGACAGGCTTGTGGCTTCTCAGCTGAATGGCCAATTGCAGCATGACACCTACTCCAAGCAACAGCAGCAGCATCATCTGTCATGCTTCAGTTTCAGTCATGTTGTTAATGATGATGTTCAGGTGCCAGCAACCCATCACTCACATTCAAGCAGATCATTAATCAATCAAATCACCGAGATCAACGGTGACAACAGCACCAACAACGAGAATGATCTATGGAGCATCACAAAGTCATCTTCAGATCCACTGTGTCACATGCCCGTACTATAA 1194 0.4514 MNLSINGQSQVPPGFRFHPTEEELLQYYLRKKVAYEKIDLDVIREVDLNKLEPWDIQEKCKIGSTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSGLRRIGLRKTLVFYKGRAPHGQKSDWIMHEYRLEDNTRDSVQVTGPAGESLQEEGWVVCRVFKKKNYQKNIDSPKTSSTSISMNSDTQQILGSGTDHRILDQILSYMGTTSCKMENESFGKFNPINVSDDDVSYSNNRFIHLPRLESPRMNNDSSAGLHLEHESSLGAGCGYDQSVVDIFTETEPCEDHEVSETKLENWVALDRLVASQLNGQLQHDTYSKQQQQHHLSCFSFSHVVNDDVQVPATHHSHSSRSLINQITEINGDNSTNNENDLWSITKSSSDPLCHMPVL 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00292 397 Pfam No apical meristem (NAM) protein 12 139 IPR003441 GO:0003677|GO:0006355
Bach1g00292 397 ProSiteProfiles NAC domain profile. 11 170 IPR003441 GO:0003677|GO:0006355
Bach1g00292 397 SUPERFAMILY NAC domain 7 170 IPR036093 GO:0003677|GO:0006355
Bach1g00292 397 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 303 - -
Bach1g00292 397 Gene3D NAC domain 20 175 IPR036093 GO:0003677|GO:0006355
Bach1g00292 397 FunFam NAC domain-containing protein 20 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00292 Bach-Chr1 3462113 3464567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00292 1 358 NAC Transcription Factor Family AT2G46770 54.121 2.02e-118 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach1g00292 NAM 1.9e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00292 - - pop:7489087 459.529