Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00260 GGACACTCCTCTTCCTCTCTGTCATTTCCTTTCCTCCCATTTTAAAGTCTCACTCTTTGTTTCTAGCTTATCACTGAACTCTGCCCTGGTCAGTGCCTTGAAGTAAAAGCCTGGAACCATTCACTGATAGTTCTCTTTCTCTCATTCACACGCTCTCTGGTACTCTCACAATTGCTCAATTGAACATAGTCTGGAAATGCCGAGCGTTTCTTCCATATGTCATCCCGAGGTTTCTAGTATCCAATCCAATGTAGTTGGACCAGAATTACTGCGCAATTATGGGAGAACCGTTTGAAGCAGAGGATAGGGTCGGAAGAATCTGTAAAGCTGACCCCTGTGTTTGAATATTGTCTTAAGACAATGAAGATTCAAAGGATGAAGCCGTCTCATCGTCAGGATCTTGATGATTTTTATACAGGTCCTAACAGTTCCACTCCTGCTTGTCAAGAGGATCAAGGACCAGTGAAAAGGAGGAAGGTCTCCAAGAATGCAACTGGAACCCATCTTGATGCTAATAAGAAAGCCCCAGTGAAGAAACATGGAATTGGAAAAGGTTTGATGACAGTTTGGAGGGCAACACATCCCGATGCAGGAGACCTTCCTATTGACTTTAGCTTTATTGGCCAAGAAAATGCTGGATTGCCTCAAAGCTCAAATTCTATATTACAGAAATCAATCTGTGGGAACAGGAAGTCATCAAGGAAACTAGATATGACTGGGAGGCCAAAAAATAAATTGCAGGGGAAGAGGAAGCCTTTCATTGAAAGAAGAATGGTGGAATCTAACAAAAATGCAAGTCAAAAGCAGAAATGTGAACTTGCTTTAGATAGAGCAATATCTGAGGAAGAGTTTGATCGAATTGCAATGCTAATTGATGATGAAGAGCTAGAGCTGAGAGAGTTACAAGCTAGACCAGATCCACTTATATGTTCTGAGCATCTTGTGGGCAGTGGAATGCTTGGCTGCTCACTTTGTACAGATTCACTAGCCAAGTTCCCCCCAGATACTGTTAAGATGAAGAAACCCATTTCTTTGCAACATTGGGACTCTTCGCCGGAAATTGTTAAGAAACTATTTAAGGTCTTCCATTTTCTTTATACATATGCTGCAGTTATTGATGTATGTCCCTTCACTCTTGATGAGTTTGCTCAAGCATTTCATGATAAGGACTCGGTGCTTCTTGGAAAGATTCATGTGGCACTTCTCACACTTCTCCTATCTGACATCAAAGTGGAGCTTACCAATGCATTTCTGCCTCGTTTGAATAAATCGTGCAATTTTCTTGCATTGCTTCACTCAGTTGATAATTTGGGCTATTCTCTGGACTTCTGGAAGAGATCTCTGAACCCTCTTACCTGGGTAGAAATACTCCGTCAAGTATTGGTTGCAGCTGGTTTTGGTTCAAAGCAAGTTATCTTGCCAAGAGAAGCCCTTAGCAAGGAACTAAATCTTATGGTGAACTATGGCCTACGCCCTGGAACCTTGAAGAGTGAATTATTTAAAATCTTGTCAAAACAAGGAAACAATGGGTTGAAAGTATCTGAGTTAACTAATTCAATTCAGATTCTAGAATTAAAACTTGCCAGCACAAGAGAGCAACTGGAGTCTTTAATATGTTCCACACTTTCAAGTGATATTACTTTATTTGAAAAGATTTCATCATCTGCATATCGACTACGCATGACCTCTATTATGAAGGACTTTGATGATTTTCAGTCAGATACGGAGAACTCAGGGAGTGTTGATGATGAACTTAATGACAGTGATGCCTGTAGCAGTGGTGACGATTGGGAATTTGATTTAGAAAAACCTAATTTAAGAAAATTTAGAGGACCAAAAAATCATAAAACTAAAACTAATATGTTGGCAATGCACACTGAAATTGATGAGAGCTATCGTGGGGAAGTATGGTTGTTAGGACTGATGGAGGGTGAATATTCAGATCTGAGCATTGAAGAAAAGTTGAATGCATTGGTGGCTCTGACTGATCTTCTTAGTTCTGGATCCAGCATCAGAATGAAGGACCCAACTAAAGTAACAGCTGAGTACAATTCTAGCATCCAATATCATGGTTCTGGGGCAAAAATAAAGAGGTCGTCAGTAAGGAAGCCTGAGCCATTCTGGAACCAGATTTTACAAATGCAATGTGTCAAAGAAGTGCACTCCTCACTGGATTCTCACTCCTGTCCAGTGGATTCCTCATCATTAATATCAAATTCATATAATCATAAGGAATCTTTTGGGAAGGGAAAAGAAGCAGAAGTAACAAATTTAGTTAAATCAAACACTATTCAATCAGTGTTCTTGGGATCTGATCGTAGATACAACAGATACTGGCTTTTCTTGGGCCCTTGTAATGTGGATGACCCTGGACATCGGAGGGTATATTTTGAATCTTCTGAAGATGGTCACTGGGAGGTGATTGATACTGAAGAGGCATTGTGTGCTTTGTTGTCAGTTTTGGATGACAGAGGTAAACGGGAGGCTCTTCTTATTGAATCTTTAGAGAAGCGTCTAGAATCACTTTGCAGAGCTATGTCTAGGGTAATGGCTAATTGTACTGGAATGGGGCATCTGTCATTTCCTGATCAGTCTCAGCTAGATATGGTTGCGGATGACAGTTATTCTCCAGTATCTGATGTGGAGAACTTAAGCCTGACTGAGACTGCAAAAGACTGTCTGCCTTCAGCTGGAGCCATAATGCTAGAAGCTGGAAAGAAGGGAGAGGAGCAAGTGAAAAAATGGATCCGTCTTCAAGCATATGATTCATGGGTCTGGAACTCCTTTTATTTAGATCTTAATGTTGTAAAATATGGTAGGAGATCTTATCTGGATTCTCTGGCTAGATGTGAGGGTTGTCATGATCTGTACTGGAGAGATGAGAGACACTGTAAAATTTGTCATACAACATTCGAACTTGATTTTGATTTAGAGGAAAGATACACAATTCACACAGCCACATGCAGGGAGAAAGAAGACAGCAATGCATTTCCAAATCATAAAGTCTTATCATCACAGATTCAATCGCTGAAAGCTGCAATTTATGCTATTGAGTCTGTTATGCCTGAAGATGCCCTGGTAGGTGCTTGGAGAAAATCTGCTCACAAACTATGGGTCAAACGACTTAGACGGACCTCAACTTTGGTGGAGCTTTTGCAGGTTCTTGCAGATTTTGTTGGTGCCATCAATGAGGACTGGTTGTTTCAATGTCCTTTTCCAGAAGGTGTAGTTGAAGAAATCGTTTCCTCTTTTGCATCTATGCCCCATACTTCATCTGCCCTAGGTCTATGGTTAGTGAAATTAGATGGCATAATTGCTCCTTACCTGGACAGAGTCCATCCTCCAAAGAAGCAGGGAATCAATAAGAGGTAACCTTCCTTGCAGATAGGGCTACGTATGTGTATGCAAGTAAAAGTAGATACCTGCATATGGGCGTTGAAACGTTGGAGTGCCCATTTTACCTGTTTATGCTCCAAGATCAAATATGCATTTGCTGACTGACTCGGCCCCCCATTTGGTGAAGGCAATATTTTTTGTTTGTAGAAAGCAGAGTTCTTCCTTTTTTGGTTATTAGTGTATATGGGCTAGGGGATGATGTTGATCAGATTTGTACAGGCAGGCATTTGATTAGATAAATTCAGGGTAATTTTGAGTTTTTTTGGTGCGTAAACCCACTTGGTGCAAGGTTACCTAGGTTCCATGTTTACAGCACCA 3714 0.4079 MKIQRMKPSHRQDLDDFYTGPNSSTPACQEDQGPVKRRKVSKNATGTHLDANKKAPVKKHGIGKGLMTVWRATHPDAGDLPIDFSFIGQENAGLPQSSNSILQKSICGNRKSSRKLDMTGRPKNKLQGKRKPFIERRMVESNKNASQKQKCELALDRAISEEEFDRIAMLIDDEELELRELQARPDPLICSEHLVGSGMLGCSLCTDSLAKFPPDTVKMKKPISLQHWDSSPEIVKKLFKVFHFLYTYAAVIDVCPFTLDEFAQAFHDKDSVLLGKIHVALLTLLLSDIKVELTNAFLPRLNKSCNFLALLHSVDNLGYSLDFWKRSLNPLTWVEILRQVLVAAGFGSKQVILPREALSKELNLMVNYGLRPGTLKSELFKILSKQGNNGLKVSELTNSIQILELKLASTREQLESLICSTLSSDITLFEKISSSAYRLRMTSIMKDFDDFQSDTENSGSVDDELNDSDACSSGDDWEFDLEKPNLRKFRGPKNHKTKTNMLAMHTEIDESYRGEVWLLGLMEGEYSDLSIEEKLNALVALTDLLSSGSSIRMKDPTKVTAEYNSSIQYHGSGAKIKRSSVRKPEPFWNQILQMQCVKEVHSSLDSHSCPVDSSSLISNSYNHKESFGKGKEAEVTNLVKSNTIQSVFLGSDRRYNRYWLFLGPCNVDDPGHRRVYFESSEDGHWEVIDTEEALCALLSVLDDRGKREALLIESLEKRLESLCRAMSRVMANCTGMGHLSFPDQSQLDMVADDSYSPVSDVENLSLTETAKDCLPSAGAIMLEAGKKGEEQVKKWIRLQAYDSWVWNSFYLDLNVVKYGRRSYLDSLARCEGCHDLYWRDERHCKICHTTFELDFDLEERYTIHTATCREKEDSNAFPNHKVLSSQIQSLKAAIYAIESVMPEDALVGAWRKSAHKLWVKRLRRTSTLVELLQVLADFVGAINEDWLFQCPFPEGVVEEIVSSFASMPHTSSALGLWLVKLDGIIAPYLDRVHPPKKQGINKR 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00260 1003 MobiDBLite consensus disorder prediction 1 58 - -
Bach1g00260 1003 ProSiteProfiles DDT domain profile. 232 291 IPR018501 -
Bach1g00260 1003 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 645 718 IPR028941 -
Bach1g00260 1003 Coils Coil 164 184 - -
Bach1g00260 1003 PANTHER HOMEOBOX PROTEIN SIX 128 984 - -
Bach1g00260 1003 SMART testlast3 232 291 IPR018501 -
Bach1g00260 1003 MobiDBLite consensus disorder prediction 16 30 - -
Bach1g00260 1003 Coils Coil 393 420 - -
Bach1g00260 1003 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 515 552 IPR028942 -
Bach1g00260 1003 Coils Coil 712 732 - -
Bach1g00260 1003 Pfam DDT domain 235 288 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00260 Bach-Chr1 3211099 3221581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00260 147 985 Homeobox Transcription Factor Family AT1G28420 27.345 1.22e-77 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bach1g00260 WSD 2.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00260 - - gmx:100802783 1426.38