Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00253 ATGCTCTAATTGCTGGATAAAGCTATTAAGAGCTCGATTTCTATTGATAACTCCCTGGAGCTTGGATTAATCATCAGAGAAATGTATTTTTGATACTATTCACAAATACAGCTACAAGTTTTCCAGGACGATAAAAACAATGAAAACGCCGGCCGATGGAACCGCCGGAGCTGCCGCAACGAATCCCTGCGAAGGAGGAGAAAAAAAGTGCATCAACCCGGAGCTTTGGCAAGCTTGTGCAGGGCCGCTGGTGAACCTGCCACCGGCTGGGACTCATGTCATTTACTTCCCTCAAGGTCACAGTGAACAGGTTGCAGCGTCTTTAAAGAAAGATGTGGATGCCCAAATTCCAAACTATCCGAATCTGCCCTCAAAGTTATTGTGTCTCCTTCACAATGTCACCTTGCATGCTGACCCAGAAACAGATGAAGTATATGCTCAGATGACACTTCAACCAGTGCCTTCTTATGACAAGGATGCATTATTAAGATCAGATCTTGCACTCAAGTCCAATAAGCCGCAACCTGAGTTCTTCTGTAAGCAATTGACAGCCAGTGATACCAGTACTCATGGAGGATTCTCTGTGCCCCGCCGTGCAGCAGAGAAGATTTTCCCCCCTCTTGATTACTCTATGCAACCGCCTGCTCAAGAACTCATGGCAAAGGATTTGCACGAGAATGTTTGGACATTCCGCCATATATATAGAGGACAACCAAAGCGTCACTTACTTACAACTGGATGGAGTCTATTCGTTAGTGGAAAGAGGCTCTTTGCTGGAGATTCTGTTTTATTTATACGTGATGAAAAGCAGCAACTACTTTTGGGAATCCGACGAGCCAACAGGCAACCTACAAATATATCATCCTCGGTACTATCAAGTGATAGTATGCATATTGGAATTCTGGCAGCAGCAGCTCATGCTGCCGCGAACAATAGCCCTTTCACTGTGTTCTATAATCCTCGGGCAAGTCCCTCAGAATTTGTTATTCCTTTAGCCAGGTACTACAAGGCTGCCTATAGCCACCAAATATCGCCTGGCATGCGCTTCCGGATGATGTTTGAAACTGAAGACTCAGGAACAAGAAGGTATATGGGTACAATTACGGGTATCAGTGATCTAGATCCTTTGAGATGGAAAAACTCGCAATGGCGTAATTTGCAGGTTGGTTGGGATGAATCCACTGCTGGGGACAAACGCAGTAGGGTCTCAATCTGGGAAATTGAACCTGTGACTGCTCCATTTTTCATCTGCCCACCTCCATTCTTCAGATCAAAGCGACCAAGAGAACCAGGAGTGCCAGATAACGAACCCTCTGATTTTGATAATGTTTTTAAGCGGACAATGCCTTGGCTTGGTGATGATATTTGCATGAAGGATCCCCAAGCTCTCCCTGGACTAAGCTTGGTTCAATGGATGAATATGCAGCAAAATCCTGCCTTGGCTAGTGCTTTACAGCCCAATTACTTGCATTCCTTGTCCGGGTCTGCTCTACAAAATCTTCCTGGTGCAGACATTGCCCGTCAGTTGGGATTTTCTGCTCCACAAATTTCCCAGTCAAACAGTGTAGCCTTTAATGCTCGGCTGCTTCAGACTGCACAACAGCTGGATCACCTTCAGAAGCTACCATCCACATCTAGTGCATTGGGAACGGCAATGCAGCCACCGCAACAGTTGGGTGATATCACAAGGCAGAATTTGGTGAATCAAACTCAACCACAGAATCAAGCCCAGGCCCAACTTCTGCATCCTCAGAATCTTGTTCAAACAAACAATATTCTTCAACAGCAGCAATCATCCATGCAGAACCATCTAATCCATCGAAACCTTGCTCAGAACTCACAGCAGCAGCAACAGACAATTATGGGTCAGAGTCAACAAAACCTGGTTCAATCTCCTATGCCTGATCAAGTTCATCAACAATTACAAATGTCTGACAATCAGATTCAGCTTCAATTGTTACAGAAGTTACAACAACAACAACAAGCACTTTTGGTACAGCAATCTGCGTTGCCACAGCCTATTCAACTTGCCCAAATCCAAGACCAGCAGAAGCAGCTTTTAGATGTGGCACAAAATTATTCTAGGTCTTTAATGCCTGGTCAAGCGCTGGAGATTCCTCCAATGCCTCAAAACTCACTCCCTGAGGCTAGTTCTACTCCACATCAGATGACGAAGATTAATAGCCAAACCAATATTCAGTTCTCTCATATGTCTCAACAGCCAAAGCTTCAACAGCAACCTAGCTCAGTGTCTGAAATATCTGGGCACATGGGACTTCCTCCTATGCCTAACACCAACCAGCTCTCTGCTGCTGCTAATAGCATACTGACTGGAGCAGCTGGAGCAGGGCAATCCGTGATTACTGATGATGTTCCATCTTGTTCCACTTCACCTTCTGCAAATAACTGTGCTAATGTACTTCAATCGGCAATGAATACCCGGATGCATAGGAACACAACAATGGGGGATGACATGGCTCAATCTGCTGCAACAATCTTGAGTCCAAGCGTTTTAGAAACCATGTCATCGAATGCAAGCTTGGTGAAAGATTTACAGCCGAAGTCTGAAGTTAGGCCTTCTTTGAACATTTCCAAGAGTCAAAATCAAGGAAATTTCACCCCACAATCATATTTGAATAGTGGGACTGCCCATACTGATTATTTGGATACATCATCTTCCACAACTTCAGTTGGCCTCTCTCAGAATGAAACTCAAGTACATCAGACTAATAACCCATTATACAATCCACAGCCAATATTGTTCAGGGACAATAGTCAAGATGGGGAAATTCAGGCAGATGCTAGGAGCCATGTTCCATTTGTGAATAACGTTGATGGTCAATTGGGAATGCCGCCGAACACAGATCATCTGTCAACCAAAGGCACAGTTGGGCTGGGGAAGGATTTGTCAAGTGACTTTCCATCAGTAAGCATGCTTGGTCATTATGAAAATAACACAGACGCTCAGCAGGAACTTTCATCTTCAATGGTTTCGCAGGCATTCGGAGTTCCTGATATGACCTTCAATTCAATTGATTCCACAATAAATGATAGCAGCTTCTTAAACAGGGGTGCATGGGCCCATGCACCCCCTCCACCTCCACCACCACAATTTCAACGGATGAGGACATATACAAAGGTGTACAAACGGGGGGCTGTGGGAAGGTCAATAGACATAACACGATATTCAGGGTACGAAGCACTTAAACAGGATCTGGCTCGAAGATTTGGCATAGAGGGACAATTGGAGGATCGGCAAAGGGTTGGCTGGAAACTTGTTTATGTGGATCATGAGAATGATGTTTTGCTAGTGGGAGATGACCCTTGGGAGGAGTTTGTGAACTGTGTCCGCTGCATTAAAATACTTTCTCCTCAGGAAGTGCAACAGATGAGCTTGGATGGTGATTTTGGTAATGGTAGCCTTCCAAATCAAGCCTGCAGCAGCTCTGATGACGTTTCATGTCCTGCAGCACAACTTAGGACAATATTCTGCAGTTAG 3499 0.449 MKTPADGTAGAAATNPCEGGEKKCINPELWQACAGPLVNLPPAGTHVIYFPQGHSEQVAASLKKDVDAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQPVPSYDKDALLRSDLALKSNKPQPEFFCKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELMAKDLHENVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLARYYKAAYSHQISPGMRFRMMFETEDSGTRRYMGTITGISDLDPLRWKNSQWRNLQVGWDESTAGDKRSRVSIWEIEPVTAPFFICPPPFFRSKRPREPGVPDNEPSDFDNVFKRTMPWLGDDICMKDPQALPGLSLVQWMNMQQNPALASALQPNYLHSLSGSALQNLPGADIARQLGFSAPQISQSNSVAFNARLLQTAQQLDHLQKLPSTSSALGTAMQPPQQLGDITRQNLVNQTQPQNQAQAQLLHPQNLVQTNNILQQQQSSMQNHLIHRNLAQNSQQQQQTIMGQSQQNLVQSPMPDQVHQQLQMSDNQIQLQLLQKLQQQQQALLVQQSALPQPIQLAQIQDQQKQLLDVAQNYSRSLMPGQALEIPPMPQNSLPEASSTPHQMTKINSQTNIQFSHMSQQPKLQQQPSSVSEISGHMGLPPMPNTNQLSAAANSILTGAAGAGQSVITDDVPSCSTSPSANNCANVLQSAMNTRMHRNTTMGDDMAQSAATILSPSVLETMSSNASLVKDLQPKSEVRPSLNISKSQNQGNFTPQSYLNSGTAHTDYLDTSSSTTSVGLSQNETQVHQTNNPLYNPQPILFRDNSQDGEIQADARSHVPFVNNVDGQLGMPPNTDHLSTKGTVGLGKDLSSDFPSVSMLGHYENNTDAQQELSSSMVSQAFGVPDMTFNSIDSTINDSSFLNRGAWAHAPPPPPPPQFQRMRTYTKVYKRGAVGRSIDITRYSGYEALKQDLARRFGIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSLDGDFGNGSLPNQACSSSDDVSCPAAQLRTIFCS 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00253 1119 CDD B3_DNA 131 223 IPR003340 GO:0003677
Bach1g00253 1119 Pfam B3 DNA binding domain 132 233 IPR003340 GO:0003677
Bach1g00253 1119 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 21 612 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach1g00253 1119 MobiDBLite consensus disorder prediction 811 872 - -
Bach1g00253 1119 Gene3D - 991 1085 - -
Bach1g00253 1119 FunFam Auxin response factor 296 367 - -
Bach1g00253 1119 Gene3D - 130 233 IPR015300 -
Bach1g00253 1119 SUPERFAMILY DNA-binding pseudobarrel domain 121 261 IPR015300 -
Bach1g00253 1119 FunFam Auxin response factor 130 234 - -
Bach1g00253 1119 Pfam Auxin response factor 258 341 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach1g00253 1119 SMART B3_2 132 234 IPR003340 GO:0003677
Bach1g00253 1119 FunFam Auxin response factor 991 1085 - -
Bach1g00253 1119 Pfam AUX/IAA family 996 1081 IPR033389 -
Bach1g00253 1119 ProSiteProfiles PB1 domain profile. 996 1080 IPR000270 GO:0005515
Bach1g00253 1119 MobiDBLite consensus disorder prediction 655 675 - -
Bach1g00253 1119 Gene3D - 296 367 - -
Bach1g00253 1119 MobiDBLite consensus disorder prediction 804 872 - -
Bach1g00253 1119 SUPERFAMILY CAD & PB1 domains 1009 1074 - -
Bach1g00253 1119 ProSiteProfiles B3 DNA-binding domain profile. 132 234 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00253 Bach-Chr1 3158918 3165269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00253 1 475 B3 DNA Binding Superfamily AT1G19220 71.339 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach1g00253 AUX_IAA 8.1e-07 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00253 - - ccaj:109803454 1703.72