Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00246 ATGGCACCCAGTGGTGTGCCTTGGGTTCCAATCATATTCATCATCGTACCCATTATTAACCATCTTGTTGTCCCTTCTTTTGGGGCTTCCGAGGCCGAATTTCTCCTCAAGTTCAAGGAATCCCTTCAAGACAACAATGCTTTATCCTCTTGGAATCAATCAACTCCTCCATGCTCAGGTCAAAATGGCAATTGGGCTGGTGTTCTCTGTTATAATGGAAATGTCTGGGGATTGAAACTTGAGAATATGGGGCTCAAAGGGGTCATTGATGTAAATTCTCTTAAAGAGTTGACAAATCTCAGGACATTAAGCTTCATGAACAACAATTTTGAAGGTGATTGGCCAGAATTCCATAGCCTAGTGGCTCTCAAGACCCTTTACCTTTCAAACAATAAGTTTAGTGGGGAGATTCCTGCTCAAACTTTCCAGGGAATGCAATGGTTGAAGAAACTTCATTTGTCCAATAATCAATTTACCTCTTCTATTCCAGCTTCCCTCGTCTTATTGCCTAGGCTTATGGATTTGAGATTGGACAACAACAAGTTCACTGGCACCATTCCCCAAGTCCAACAAAAAACTTTGAAAAGCTTTAATGTAGCTAACAATCAGTTGAATGGCCAAATACCAGCCATACTTAGCAACATGCCTGCCTCATCCTTTGCAGCAGGTAATCAAGGCCTATGTGGAGCTCCACTAGAAGCATGCCAATCAAAGAAACCTTCAACTATCAGTATTGTTGTGGTTGCTGTAGTTGTTGGTGTTGCGGTAATTGTGATTGTTCTAGTGATCTTCATGCTCAATAGGAGAAAACAACATTCAACAGCATCAGTGGAGAATCCAGGATCAAACCCTCAAAGGAAATCTTGTCCCAAAGATATAGACGATGCTAGTGTACGGTCAGCAGGATCAAGTGCCTCCACACATAGCAGAAGAGGAGACAACATGAAATTAACATTTATTAGGGACGACAGAGACAAGTTTGATCTGACAGAATTGCTAAGAGCCTCAGCTGAGATTTTGGGTAGTGGTTGCTTCAGTTCTTCTTACAAGGCTTCTTTGTCGAATGGATCAATGATGGTTGTCAAGAGATTTAAAGCAATGAACAACGTTGGAAGGGAAGAGTTTCAGGAACACATGAGGAGAATAGGAAGGTTGAAACATTCTAATTTACTTCCTCTTGTTGCATACTACTATAGAAGAGAGGAGAAGCTCTTGGTTACAGATTTTGTTACAAATGGCAGCTTGGCTATTCGTCTTCATGGGTATCAAGGTCTGGGGCAGCCAAGCCTTGATTGGCCAACCAGGTTGAAGATTGTTAAAGGGATAGTAAAAGGTCTTGAATATCTCTACAAGATGATGCCAAGCCTAATTGCACCTCATGGGAATCTCAAGTCCTCAAACGTTCTTCTCACTGAATCTTTCGAGCCCCTACTGAATGATTATGGTTTAGCCCCAGTAGTAAACCAGGAGCTTGCTCATGACATCATGGTGATCTATAAATCCCCAGAACACATCCAAAATGGAAGAATTACAAAGAAAACCGATGTTTGGAGTCTGGGAATATTAATCCTGGAGATTTTGACTGGAAAATTCCCTGCCAACTTCCTACACCAAGGAAAATCAAGTGAGGAGGATTTGGCCAAATGGGTTCGTTCAGTTGTCCCAGAACAGTGGACAAACGAGGTGTTTGACAAAGAAATGGGATCGACCAAGAACGGTGAAGGGGAAATGGTGAAGCTTTTGAAGATTGGGTTGGGTTGTTGTGAAGGAGATATGGATAAGAGGTGGGATTTGAAAGAAGTTGTTGAGAAAATCCAAGAGGTGAAAGAGAGGGAGAATGATGATGATTTCTATTCTACATATAGTGAAGCTGACATGATATCAAGAAGGGGATTGTCAGATGAAATCAATTTTTCTTGA 1920 0.4156 MAPSGVPWVPIIFIIVPIINHLVVPSFGASEAEFLLKFKESLQDNNALSSWNQSTPPCSGQNGNWAGVLCYNGNVWGLKLENMGLKGVIDVNSLKELTNLRTLSFMNNNFEGDWPEFHSLVALKTLYLSNNKFSGEIPAQTFQGMQWLKKLHLSNNQFTSSIPASLVLLPRLMDLRLDNNKFTGTIPQVQQKTLKSFNVANNQLNGQIPAILSNMPASSFAAGNQGLCGAPLEACQSKKPSTISIVVVAVVVGVAVIVIVLVIFMLNRRKQHSTASVENPGSNPQRKSCPKDIDDASVRSAGSSASTHSRRGDNMKLTFIRDDRDKFDLTELLRASAEILGSGCFSSSYKASLSNGSMMVVKRFKAMNNVGREEFQEHMRRIGRLKHSNLLPLVAYYYRREEKLLVTDFVTNGSLAIRLHGYQGLGQPSLDWPTRLKIVKGIVKGLEYLYKMMPSLIAPHGNLKSSNVLLTESFEPLLNDYGLAPVVNQELAHDIMVIYKSPEHIQNGRITKKTDVWSLGILILEILTGKFPANFLHQGKSSEEDLAKWVRSVVPEQWTNEVFDKEMGSTKNGEGEMVKLLKIGLGCCEGDMDKRWDLKEVVEKIQEVKERENDDDFYSTYSEADMISRRGLSDEINFS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00246 639 Pfam Leucine rich repeat 136 182 IPR001611 GO:0005515
Bach1g00246 639 Pfam Protein kinase domain 337 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00246 639 SUPERFAMILY Protein kinase-like (PK-like) 338 607 IPR011009 -
Bach1g00246 639 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 611 IPR046959 -
Bach1g00246 639 MobiDBLite consensus disorder prediction 273 310 - -
Bach1g00246 639 FunFam pollen receptor-like kinase 1 303 409 - -
Bach1g00246 639 SUPERFAMILY L domain-like 55 216 - -
Bach1g00246 639 FunFam Pollen receptor-like kinase 1 410 619 - -
Bach1g00246 639 FunFam Nuclear pore complex protein NUP107 28 188 - -
Bach1g00246 639 ProSiteProfiles Protein kinase domain profile. 334 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach1g00246 639 Gene3D Ribonuclease Inhibitor 192 235 IPR032675 -
Bach1g00246 639 Gene3D Phosphorylase Kinase; domain 1 299 409 - -
Bach1g00246 639 Gene3D Ribonuclease Inhibitor 29 191 IPR032675 -
Bach1g00246 639 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Bach1g00246 639 Gene3D Transferase(Phosphotransferase) domain 1 410 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00246 Bach-Chr1 3101798 3104798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00246 1 639 Receptor kinase-like Gene Family AT5G35390 54.018 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bach1g00246 Pkinase 6.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00246 - - gmx:100804368 825.083