Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00238 ATGTTTAAGTGGCACCATCCTAACGGTCCTGATGGAGATAGTCCATTCTCCATCACCAGAAACCATCGTTCCCCTCCGTGGGCTGCCACTGCAAGTCCATGGCCGTCGTCAGCTTCGCTTCCCAACACTGACGGAGCTCACCCACTTAATCAAAAACACAGGGTACTTGGCACCCGGACACTCGGCATTGCAAGCCACTCCCTCCTCTATCGAAGGCCCTGGTTTTATCCATTACAGTTATTACGGTCATCTGAGAGGTTTTTAATCATTAAAATGGATCCTCATACTGAAGAACTGCCTCAATACATACATATAGATCAGAACGAATTTCTGTATAGAAGGCATAAGAAGCAGAGGGAGGAGGATATTGCTGTGTGTGAATGCAGATACAATGCAATTGATCCTAATAGTGCATGTGGGGATAGGTGCTTGAATGTATTAACCAGCACTGAATGCACTCCGGGTTACTGCCCTTGTGGTATCCTTTGCAGGAATCAGAGATTTCAAAAGTGTGAAAGTGCAAAAACAAAATTCTTCAAAACTGAAGGCCGTGGGTGGGGTCTTCTGGCTGATGAGAACATAAAGGCTGGCCAATTTATCATTGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAGCGGAGATCCCATGCTTATGAAATTCAAGGTCTCAAGGATGCATTTATCATTTGTCTTAATACATCTGAATCTATTGATGCAACCAGAAAAGGAAGCCTTGCTAGATTTATAAATCATTCCTGTCAGCCAAATTGTGAGACAAGAAAATGGACTGTCTTGGGGGAAGTAAGAGTTGGAATATTTGCAAAACAAGATATTCCTATTGGAACAGAATTGGCATATGATTATAATTTTGAATGGTTTGGGGGTGCAAAGGTTCGCTGCTTGTGTGGAGCAGCCATCTGTTCTGGATTTCTTGGAGCAAAATCTCGTGGTTTTCAGGGAAATTCTGAGCAGGAGGATACTTATCTATGGGAAGATGATGATGAAAGGTACTCAGTTGATAAAATTCCACTATATGATTCTGCAGAAGATGAACCTCCCTCAAAGGTCCTTAAAAATTTAAATCCAGAAAACTCTGGGACCAATTTTAATGGAACAATTCAACACTCCATGGATGTTACCGTAAAAGCAGAGCACATATCAGAGTCCAGTTCTCTCAATGTTCAGCAGTCTGAGTTTTTGGGTGCCGACAAGATAAAAGGTGAATTAGGAAGTGAGGATTTGAAATTGTATGCACAGGAAACTCAACAGGCCTTTTCACAAAAGAATGGAATGATCTCACGTATCCAAAGTAATACGGCAGGCCAAAACCATCACACTGGACCTGGGTCTGTGTCTACCAAAAAGTCGAAGGCATTTAAAAATAGAAGGCGGAAAAAGCTAGCACAGAAGCAGGTGGATGCAAAATCTGCTGCTCTACTCTTATCCTCCAAGGAAGCACAAGAGGAGATTTTAAGAAATGAGGAAATAAAGAATGAAGCTAATGCTGCGCTTGATTCCTTATACAATGAAATTCGACCCGCCATTGAAGAACATGAGAGGGATACTCAAGACAGTGTATCAACTTCTGTGGCAGAGAAGTGGATAGAGGCTTGCTGCTTGAAATTGAAGGCAGAGTTTGATCTTTACTCCTCAATTGTCAAAAATTTTGCTTGCACTGCTCATAGGACACATGGTGAAGCAAAAGGTTCTGAGGTAGACAATGAAAACGAAATCAAGCTTTTGACAATGTGATTTCTTCTTTAGTTTTTGTCATCTATAACTGTACTTCAATCCATGATTTCACAAAATGTCTGGTAGTTTTTG 1830 0.4137 MFKWHHPNGPDGDSPFSITRNHRSPPWAATASPWPSSASLPNTDGAHPLNQKHRVLGTRTLGIASHSLLYRRPWFYPLQLLRSSERFLIIKMDPHTEELPQYIHIDQNEFLYRRHKKQREEDIAVCECRYNAIDPNSACGDRCLNVLTSTECTPGYCPCGILCRNQRFQKCESAKTKFFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRSHAYEIQGLKDAFIICLNTSESIDATRKGSLARFINHSCQPNCETRKWTVLGEVRVGIFAKQDIPIGTELAYDYNFEWFGGAKVRCLCGAAICSGFLGAKSRGFQGNSEQEDTYLWEDDDERYSVDKIPLYDSAEDEPPSKVLKNLNPENSGTNFNGTIQHSMDVTVKAEHISESSSLNVQQSEFLGADKIKGELGSEDLKLYAQETQQAFSQKNGMISRIQSNTAGQNHHTGPGSVSTKKSKAFKNRRRKKLAQKQVDAKSAALLLSSKEAQEEILRNEEIKNEANAALDSLYNEIRPAIEEHERDTQDSVSTSVAEKWIEACCLKLKAEFDLYSSIVKNFACTAHRTHGEAKGSEVDNENEIKLLTM 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00238 585 Pfam SET domain 185 291 IPR001214 GO:0005515
Bach1g00238 585 SUPERFAMILY SET domain 99 311 IPR046341 -
Bach1g00238 585 ProSiteProfiles SET domain profile. 169 291 IPR001214 GO:0005515
Bach1g00238 585 MobiDBLite consensus disorder prediction 440 457 - -
Bach1g00238 585 PANTHER SET DOMAIN PROTEINS 16 545 - -
Bach1g00238 585 MobiDBLite consensus disorder prediction 347 373 - -
Bach1g00238 585 ProSiteProfiles Post-SET domain profile. 298 314 IPR003616 -
Bach1g00238 585 SMART set_7 174 297 IPR001214 GO:0005515
Bach1g00238 585 Pfam AWS domain 134 171 IPR006560 GO:0005634|GO:0042054
Bach1g00238 585 Gene3D SET domain 82 330 IPR046341 -
Bach1g00238 585 FunFam Histone-lysine N-methyltransferase 88 327 - -
Bach1g00238 585 Coils Coil 485 505 - -
Bach1g00238 585 ProSiteProfiles AWS domain profile. 121 172 IPR006560 GO:0005634|GO:0042054
Bach1g00238 585 MobiDBLite consensus disorder prediction 1 50 - -
Bach1g00238 585 SMART shorttest3 121 173 IPR006560 GO:0005634|GO:0042054
Bach1g00238 585 MobiDBLite consensus disorder prediction 14 46 - -
Bach1g00238 585 MobiDBLite consensus disorder prediction 440 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00238 Bach-Chr1 2813212 2820596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00238 156 313 C2H2 Transcription Factor Family AT2G23740 33.523 2.21e-20 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bach1g00238 SET 3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00238 - - lang:109335575 746.117