Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00234 ATGAGAGCCCCAGAACCACAGGTCTACAACCTCCCATGCACAATCGCTTCTAGAGCACGCCCAAATGGCAGCAGTTTTCCTGAGCAAACCAGTTTCCCATTCCCACCTAAGTCACTCGTCCAAACATTCCCTAACTTCTCCCTTCCCTCTTCACCACCAACAATCTCTTCGTCTCAAACTAACTCACCACAATTCCATTATCACTGTCTGCGCCATCCAAAACCCAGAAAAACAAATCCACCAATCTCCCAATGAATCCGCCGGTCAGGTTAGGCCCGACGATGAGTCCTACGGCGAAGTCAAAGGCATCATCGGAAGCAGAGCTCTCGAGGATGGCGTATCCATGGAGTACCTCGTCGAGTGGAAAGACGGTCATACCCCTTCCTGGCTCCCATCCGATTTCATCGCCAAAGATGTAGTGGCGGAATATGAGACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACCAATCGGCTCTCCAGCGAATCATTGAGGCCGAAGACGGCCGCGACGTCGATGCCGTGGACAGCGACGGTCGAACCGCGCTTCTTTTCGTTTCCGGGCTCGGCTCAGAGCCGTGCGTGCGGCTGCTCGCGGAAGCCGGCGCTAATTTGGACCACCGTGACAAGAGCGCCGGCCTGACGGCACTGCACATGGCGGCCGGATACGTGAAACCGGATGTAGTGAAGCTGCTTTTGGAGCTGGGAGCGGATCCCGAGGCGGCGGATGATAGAGGACGGACACCGTTGGATCTGGCGAGGGAGATTCTGCAGGTGACGCCGAAGGGTAATCCAATGCAATTTGGTAGAAGGATAGGGTTGGAGAGCGTGATAAGATTATTGGAGGGGGAAATATTCGAGTACGGGGAGGTGCAGGAACTATTAGAGAAGAGGGGCAAGGGAGAGAACGTGGAGTATTTAGTGAAGTGGAAAGATGGTGGGGCCAATGAGTGGGTGAAGCCAATGTATATAGGTGAGGATCTAGTGAGGGACTATGAGGCTGGGTTGGAATATGCTGTGGCTGAGGCTGTGGTGGGGAAGAGAGTTGGAGATGATGGGAAATTAGAGTTATTGGTGAAGTGGGAAGATTTGGAAGAACCCACTTGGGAGCCTGAGGAAAATGTTGATCCTCAACTAATCAAAGACTTTGAACTTCAACAAGGAAATGGGCATCCTACGCTTAAATTAGAGGATACCCAACAGGCACAATTAACTAAGGATACCTAGATGGCAGCAGTTTTCCTGAGCAAACCAGTTTCCCATTCCCACCTAAGTCACTCGTCCAAACATTCCCTAACTTCTCCCTTCCCTCTTCACCACCAACAATCTCTTCGTCTCAAACTAACTCACCACAATTCCATTATCACTGTCTGCGCCATCCAAAACCCAGAAAAACAAATCCACCAATCTCCCAATGAATCCGCCGGTCAGGTTAGGCCCGACGATGAGTCCTACGGCGAAGTCAAAGGCATCATCGGAAGCAGAGCTCTCGAGGATGGCGTATCCATGGAGTACCTCGTCGAGTGGAAAGACGGTCATACCCCTTCCTGGCTCCCATCCGATTTCATCGCCAAAGATGTAGTGGCGGAATATGAGACTCCTTGGTGGACCGCCGCCAAGAAAGCCGACCAATCGGCTCTCCAGCGAATCATTGAGGCCGAAGACGGCCGCGACGTCGATGCCGTGGACAGCGACGGTCGAACCGCGCTTCTTTTCGTTTCCGGGCTCGGCTCAGAGCCGTGCGTGCGGCTGCTCGCGGAAGCCGGCGCTAATTTGGACCACCGTGACAAGAGCGCCGGCCTGACGGCACTGCACATGGCGGCCGGATACGTGAAACCGGATGTAGTGAAGCTGCTTTTGGAGCTGGGAGCGGATCCCGAGGCGGCGGATGATAGAGGACGGACACCGTTGGATCTGGCGAGGGAGATTCTGCAGGTGACGCCGAAGGGTAATCCAATGCAATTTGGTAGAAGGATAGGGTTGGAGAGCGTGATAAGATTATTGGAGGGGGAAATATTCGAGTACGGGGAGGTGCAGGAACTATTAGAGAAGAGGGGCAAGGGAGAGAACGTGGAGTATTTAGTGAAGTGGAAAGATGGTGGGGCCAATGAGTGGGTGAAGCCAATGTATATAGGTGAGGATCTAGTGAGGGACTATGAGGCTGGGTTGGAATATGCTGTGGCTGAGGCTGTGGTGGGGAAGAGAGTTGGAGATGATGGGAAATTAGAGTTATTGGTGAAGTGGGAAGATTTGGAAGAACCCACTTGGGAGCCTGAGGAAAATGTTGATCCTCAACTAATCAAAGACTTTGAACTTCAACAAGGAAATGGGCATCCTACGCTTAAATTAGAGGATACCCAACAGGCACAATTAACTAAGGATACCTAGCTTAGCCTACCTTAGTTAACCCTTCGATCTTGATGCCTTGTAATTTAATAGGGGATACCTTGTTGTACACTTGTTTAATCCATCAATCCAAATCAATTTTTC 2488 0.5189 MAAVFLSKPVSHSHLSHSSKHSLTSPFPLHHQQSLRLKLTHHNSIITVCAIQNPEKQIHQSPNESAGQVRPDDESYGEVKGIIGSRALEDGVSMEYLVEWKDGHTPSWLPSDFIAKDVVAEYETPWWTAAKKADQSALQRIIEAEDGRDVDAVDSDGRTALLFVSGLGSEPCVRLLAEAGANLDHRDKSAGLTALHMAAGYVKPDVVKLLLELGADPEAADDRGRTPLDLAREILQVTPKGNPMQFGRRIGLESVIRLLEGEIFEYGEVQELLEKRGKGENVEYLVKWKDGGANEWVKPMYIGEDLVRDYEAGLEYAVAEAVVGKRVGDDGKLELLVKWEDLEEPTWEPEENVDPQLIKDFELQQGNGHPTLKLEDTQQAQLTKDT 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00234 386 SUPERFAMILY Chromo domain-like 265 312 IPR016197 -
Bach1g00234 386 Gene3D - 71 120 - -
Bach1g00234 386 Gene3D - 313 365 - -
Bach1g00234 386 ProSiteProfiles Ankyrin repeat profile. 190 222 IPR002110 GO:0005515
Bach1g00234 386 ProSiteProfiles Ankyrin repeat region circular profile. 190 222 - -
Bach1g00234 386 Pfam Chromo (CHRromatin Organisation MOdifier) domain 319 362 IPR023780 -
Bach1g00234 386 CDD CD3_cpSRP43_like 314 363 IPR030300 -
Bach1g00234 386 MobiDBLite consensus disorder prediction 366 386 - -
Bach1g00234 386 Pfam Ankyrin repeats (many copies) 176 231 IPR002110 GO:0005515
Bach1g00234 386 ProSiteProfiles Chromo and chromo shadow domain profile. 317 373 IPR000953 -
Bach1g00234 386 SUPERFAMILY Ankyrin repeat 122 233 IPR036770 -
Bach1g00234 386 Gene3D - 263 312 - -
Bach1g00234 386 MobiDBLite consensus disorder prediction 56 76 - -
Bach1g00234 386 SUPERFAMILY Chromo domain-like 319 361 IPR016197 -
Bach1g00234 386 Gene3D - 121 262 IPR036770 -
Bach1g00234 386 SMART ANK_2a 121 152 IPR002110 GO:0005515
Bach1g00234 386 SMART ANK_2a 156 185 IPR002110 GO:0005515
Bach1g00234 386 SMART ANK_2a 190 219 IPR002110 GO:0005515
Bach1g00234 386 SUPERFAMILY Chromo domain-like 72 126 IPR016197 -
Bach1g00234 386 ProSiteProfiles Ankyrin repeat profile. 156 188 IPR002110 GO:0005515
Bach1g00234 386 PANTHER MYOTROPHIN 59 291 - -
Bach1g00234 386 SMART chromo_7 265 315 IPR000953 -
Bach1g00234 386 SMART chromo_7 316 366 IPR000953 -
Bach1g00234 386 SMART chromo_7 75 127 IPR000953 -
Bach1g00234 386 MobiDBLite consensus disorder prediction 370 386 - -
Bach1g00234 386 ProSiteProfiles Ankyrin repeat region circular profile. 156 188 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00234 144 231 CAMTA Transcription Factor Family AT5G09410 36.170 9.52e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00234 K12271 - qsa:O6P43_011413 528.865