LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach1g00204	ATGTCTGCAGATGGAGAGAGGAAGAAGAGGGTCGCCATCATCTTCGTTTCCTCCTTCTTACTGGTGTCAATGGTGGTCGCCGTTACCGTCGGCATAACAACCGACCTCAAAAATGCGTCTTCCGAAGAGGAGGAGGATGTTAACGACGGCAACAAGGCTCATGTGTCGACCTCCGGCATGAAGGCTATAAAATCACTTTGCCAATCCACAGATTACCAGAAGGAATGCGTTGATAGCCTCAAAGAGGAGGGTGGCAACGTGACAAGCACAAGAGAATTGATTAAGATTGCATTCAATGTCACTGTTGAAAAGATTATTGAAGGGTTGAAGAAAACCCAGATGTTGCAGGACGTGGAGACCGAACCCAGAGCCAAAACGGCCCTTGATTCTTGCAGGGACCTCTTGGAGGATTCCATTGATGATCTTAGGCGTTCAATTTTAAAAGTAGGGGATTTTGATGCCAAGAACTTCCATGACTTGCTCATGGATTTGAAGGTTTGGCTCAGCAGCACGATCACGTACCAAGACACGTGCTTGGATGGGTTCCAGAACACCACAAGCAAAGCTGGGCAGAAGATGAAGGAGGTGTTGGAGCTTGCTATGCATTTAAGCAGCAATGGGCTTGCCATCATCGACGAGTTGGCTATATCTTTCAACAAGCTAAATATCACAGCAGATCATCGGGGACGCAGACTCCTCAATGTTTTGGGTCACGGCGAGGTCCCGTTGTGGATTGGTGGTGGGCTTCGTCGGAAACTGCTGGTTGAGGAAACCCCGGGCATGGGTAAAGAAAAGGCTGATGTTGTTGTTGCCAAAGATGGGAGTGGAAAGTTCAATAGTATCAATGAGGCATTGAAGAAGGTGCCTATCAAGAGCAACAAATCATTCATAATCTACGTTAAGGAAGGAATTTACAATGAGTATGTTACCATTCAGAAGAATATGACCAACATCATCATGATCGGTGATGGTGAACAAAAGACACGCATCACTGGCAACAAAAACTTCATTGATGGGCTTAACACATTCAAGACCGCAACCTTCGTTGTTGAAGGGGAATACTTCATGGCTATGAACATAGGGTTTGAGAATTCTGCTGGTCCTGAGAAACAACAAGCAGTGGCATTGAGAGTGGGAGCAGACATGTCTTTGTTCTACAATTGCTCAATGGATGGGTACCAAGATACGCTTTATGCCCACACCAAGCGTCAATTCTATAGAGATTGTACTATTTCAGGCACAGTTGACTTTGTGTTTGGTGACTCCCTTTCGGTATTCCAGAATTGCACGTTCAAGGTTAGAAAGCCAATGGAAAACCAGCAATGCATTGTGATTGCACAAGGCAGAAAGGATAGATATGAACCAACAGGCATAATTATCCAAGGCGGGTCAATTGTGTCCGATCCGACATTTGATTCTGCTGAGTTGACGAACAAGGTTTACTTGGCTCGTCCATGGAAGCCTTATTCAAGGGCCATCATAATGGATGCATTCATTGGTGACTTGATCACACCCGAAGGCTATTTGCCATGGCAAATCAACAAAACATGGATGGACACTTGCTTCTACTCCGAGTACAACAACCGGGGCCCTGGTTCAAATAAATCGGAGCGGGTTAAATGGCCCGGTGTCAAGACCATTACGGCGGAACATGCTCTTGATTTCACACCACTCAGGTTTTATAAGGGAGATGGCTGGATTAAACGTACTGGAATACCATATTCCCCTGAGACCATGCCCTCCGACTCCAAGTCTGACTCCGAATCTGGATCCGATTCAAAGTCCGACTTTGACTCCAACATGATAGACTTTCACGACAAATCCAAATCCAAGCCCGACTCCGACTCTCACTCTAAGTCTGACTCTAACTTCCTTTCCAAATCAAAGTCCAAATCCAAGTCTAAATCCGACTCCAAACCCGATAACAAACACCAATCTAAATCTGAACCTTCTAATTCCAAGTCTCACTCCAAGTCCGAATCTAAGTCCAAGCCCAAGCTCAAGTCTGACTCTAATCACCATTCCAAGTCAAAGTCCAAGCCCAAGACTGACTCTTACTCCAAGCTCAACTCTAACAGGAAGTCCAAAAATCACTCCAAGTCGAAACCCAGTTCTGATTCTAAGCCCAAGTCTCATGGCAAGTCCACATCTCATCACATATCCAACTCTAAACCCGTTTCCAAGTCAAGTCCTACTCCTACAATCACTCCAAGTTGGGCTCCAGCTCTTAAGTCCAAGCAAGACTCCAATTCCCACTCCAAGCCCAAGTAA	2271	0.4571	MSADGERKKRVAIIFVSSFLLVSMVVAVTVGITTDLKNASSEEEEDVNDGNKAHVSTSGMKAIKSLCQSTDYQKECVDSLKEEGGNVTSTRELIKIAFNVTVEKIIEGLKKTQMLQDVETEPRAKTALDSCRDLLEDSIDDLRRSILKVGDFDAKNFHDLLMDLKVWLSSTITYQDTCLDGFQNTTSKAGQKMKEVLELAMHLSSNGLAIIDELAISFNKLNITADHRGRRLLNVLGHGEVPLWIGGGLRRKLLVEETPGMGKEKADVVVAKDGSGKFNSINEALKKVPIKSNKSFIIYVKEGIYNEYVTIQKNMTNIIMIGDGEQKTRITGNKNFIDGLNTFKTATFVVEGEYFMAMNIGFENSAGPEKQQAVALRVGADMSLFYNCSMDGYQDTLYAHTKRQFYRDCTISGTVDFVFGDSLSVFQNCTFKVRKPMENQQCIVIAQGRKDRYEPTGIIIQGGSIVSDPTFDSAELTNKVYLARPWKPYSRAIIMDAFIGDLITPEGYLPWQINKTWMDTCFYSEYNNRGPGSNKSERVKWPGVKTITAEHALDFTPLRFYKGDGWIKRTGIPYSPETMPSDSKSDSESGSDSKSDFDSNMIDFHDKSKSKPDSDSHSKSDSNFLSKSKSKSKSKSDSKPDNKHQSKSEPSNSKSHSKSESKSKPKLKSDSNHHSKSKSKPKTDSYSKLNSNRKSKNHSKSKPSSDSKPKSHGKSTSHHISNSKPVSKSSPTPTITPSWAPALKSKQDSNSHSKPK	756

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach1g00204	756	Pfam	Plant invertase/pectin methylesterase inhibitor	62	210	IPR006501	GO:0004857
	Bach1g00204	756	Gene3D	-	262	578	IPR012334	-
	Bach1g00204	756	MobiDBLite	consensus disorder prediction	587	691	-	-
	Bach1g00204	756	PANTHER	PECTINESTERASE	15	568	-	-
	Bach1g00204	756	Gene3D	Invertase/pectin methylesterase inhibitor family protein	59	215	IPR035513	-
	Bach1g00204	756	MobiDBLite	consensus disorder prediction	716	748	-	-
	Bach1g00204	756	Pfam	Pectinesterase	267	564	IPR000070	GO:0030599\|GO:0042545
	Bach1g00204	756	ProSitePatterns	Pectinesterase signature 1.	292	311	IPR018040	-
	Bach1g00204	756	MobiDBLite	consensus disorder prediction	699	713	-	-
	Bach1g00204	756	FunFam	Pectinesterase	261	578	-	-
	Bach1g00204	756	SMART	PMEI_2	58	210	IPR006501	GO:0004857
	Bach1g00204	756	CDD	PMEI-like_3	65	215	-	-
	Bach1g00204	756	ProSitePatterns	Pectinesterase signature 2.	411	420	IPR033131	-
	Bach1g00204	756	NCBIfam	pectinesterase inhibitor domain	59	214	IPR006501	GO:0004857
	Bach1g00204	756	SUPERFAMILY	Plant invertase/pectin methylesterase inhibitor	61	214	IPR035513	-
	Bach1g00204	756	SUPERFAMILY	Pectin lyase-like	265	576	IPR011050	-
	Bach1g00204	756	MobiDBLite	consensus disorder prediction	571	756	-	-
	Bach1g00204	756	FunFam	Pectinesterase	59	215	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach1g00204	Bach-Chr1	2465428	2467911	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach1g00204	4	575	Carbohydrate Esterase	AT3G05610	45.629	0.0	560

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach1g00204	K01051		-	gmx:100794799	681.789