Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00198 ATGACTGTGGCGTCGGATTCTTCGTCGGAGTGTTTCAGCAAGGCGAAGGCTTGGCTGCCGGGGTTTCGGTTCCATCCTACCGATGAGGAGCTGGTTCTGTATTATTTGAAGAGGAAAATGTGTAGGAAGAAGCTGAAGGTCAATATCATTGCTGAGACTGATGTATACAAGTGGGATCCTGAGGAGTTGCCTGGGCAGTCTATACTGAAAACTGGAGATAGGCAGTGGTTCTTTTTTAGTCCTAGAGATAGAAAGTATCCTAATGGTGCAAGGTCCAATCGAGCAACTAGACATGGATATTGGAAAGTAACAGGAAAGGATCGTGATGTCACATGCAACTCTCGGACAGTTGGAGTGAAAAAGACACTGGTTTTCTATAAAGGAAGAGCACCTAATGGTGAGCGGACTGATTGGGTCATGCATGAATACACCTTAGATGAAGACGAACTTAAAAGATGTCAGGGTGTTCAGGACTATTTGGCACTTTACAAGGTATACAAGAAGAGTGGAGCTGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTCAAAGAAGAAGAGTGGGCAGATGATGATTTTGTAGAATTCAATATCACTTCAACTGATGAGGAGGCTCCGATTCAGCAGCCTGATGAGGTGGTTACTTCTATTGGTACCGATGCTGTTAATGATGATATTTTAGAGATCATGAGAAAATTTTTGGATGATGATCCTGTGCATGACCAGCTACAGGTGCCTGGTTGTCCTCCAGCATTACCTCAGGTTTTTGCTGTATCAACACAAACTGATGTGGTGGATCAATTCTGTCCTGAGCTGATTGCAACATTTCACCCTAACACTGAGCAATGTCAATTAGAGCCCAGCCATGACGTCACTCAGTCGGCTATCTCTCATGTACATGTGTCTGAAGCACCTGAGGTGACATCTGCTCCCCAAAATCAAGAAAAGTTGCCTCTCCTTCATGAGGGAGACTTTTTGGAAATGGATGATCTCTTTAGTCCTGAACCTGCATTTTCAAACATGGATAAACCATTGGACAACCTGCAGTTTGAAGATGGATTATGTGAACTTGACCTGTATCACGATGCAGCCATGTTTATCCAAGACATGGGACCAATTGATCAGGAAAATTCTTTTCCACATCTATACATAAACACCCTTGGGGGAAATCTTGTAAATCAGGATTATCAGTTGCTACCCCATCCAGAGGGCGCAACTCAGGCAGGTGGTGAATTCTGGATGTATGATCAGGGAAGAGACATCATGTGTCCTCCAGAGCAAACTGATGTTTCTTTCTCTCTACCAACCTCAGGTGTTTTATGTGATTCTGCGATTGTTCCCACTGGAGGCACCCAAAATCAAAATAGCTCCGTGGAAGATGTTGGTACAAGTAGATTCACTTCTGCTCTCTGGTCCTTCGTAGAGTCTATACCTACCACTCCTGCATCAGCTTCTGAAAGTGCTTTGGTGAATCGGGCATTCGAACGAATGTCTAGCTTCAGCAGGCTGAGAATTAACACCAAGCGCACAAATGTTGTTGCAGGTAATAACACTGCAACTATAAAGACAGCAGGCAGGACTGGAGCGCTTTTCCTTTTATTACCTGTTCTTATTGCTTTATGTGCTTTCTTGTGGGTTTCTATGGGAACTTTGAGAGTATTAGGGAGATGCAACTCTTAA 1680 0.4387 MTVASDSSSECFSKAKAWLPGFRFHPTDEELVLYYLKRKMCRKKLKVNIIAETDVYKWDPEELPGQSILKTGDRQWFFFSPRDRKYPNGARSNRATRHGYWKVTGKDRDVTCNSRTVGVKKTLVFYKGRAPNGERTDWVMHEYTLDEDELKRCQGVQDYLALYKVYKKSGAGPKNGEQYGAPFKEEEWADDDFVEFNITSTDEEAPIQQPDEVVTSIGTDAVNDDILEIMRKFLDDDPVHDQLQVPGCPPALPQVFAVSTQTDVVDQFCPELIATFHPNTEQCQLEPSHDVTQSAISHVHVSEAPEVTSAPQNQEKLPLLHEGDFLEMDDLFSPEPAFSNMDKPLDNLQFEDGLCELDLYHDAAMFIQDMGPIDQENSFPHLYINTLGGNLVNQDYQLLPHPEGATQAGGEFWMYDQGRDIMCPPEQTDVSFSLPTSGVLCDSAIVPTGGTQNQNSSVEDVGTSRFTSALWSFVESIPTTPASASESALVNRAFERMSSFSRLRINTKRTNVVAGNNTATIKTAGRTGALFLLLPVLIALCAFLWVSMGTLRVLGRCNS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00198 559 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Bach1g00198 559 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Bach1g00198 559 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 278 - -
Bach1g00198 559 SUPERFAMILY NAC domain 16 168 IPR036093 GO:0003677|GO:0006355
Bach1g00198 559 Gene3D NAC domain 27 171 IPR036093 GO:0003677|GO:0006355
Bach1g00198 559 FunFam Nac domain-containing protein 86 27 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00198 Bach-Chr1 2430666 2433836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00198 3 557 NAC Transcription Factor Family AT1G34190 45.111 1.71e-147 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach1g00198 NAM 1.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00198 - - qsa:O6P43_008042 667.922