Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach1g00181 ATGGGAAAGGTTCTTCCCCCATTGATCTTCAAAAACCCTGTTAGAAGAACCTCCAGGGGATCTTCAAAGTACCTTGGGGTCAGGAGAAGGCCATGGGGAAGATATGCTGCTGAAATCAGGAATCCATATACCAAAGAAAGACATTGGCTAGGCACATTTGACACTGCTGAAGAGGCTGCCATAGCTTATGATATTTCGTCCATTAACATTTGTGGCATTGAGAATGCTCCTACGAATTTTCATTACCCATTGATATCCCTACCACCGTCACCTCCTCCTCCATTTCCACCGCCATTCCCACCGCTGACCCAACTTATGCCAGAGTTGGAAGCAAGTGATGTTTGTGCAGAGATGAATGCTGTTGATGATGGAGATCAGGAATCTTTGGTTATTGCTTCTATCTTAAAAAGTTTTTGTTATTCTGATAATTGTTCTTTTTAA 441 0.4263 MGKVLPPLIFKNPVRRTSRGSSKYLGVRRRPWGRYAAEIRNPYTKERHWLGTFDTAEEAAIAYDISSINICGIENAPTNFHYPLISLPPSPPPPFPPPFPPLTQLMPELEASDVCAEMNAVDDGDQESLVIASILKSFCYSDNCSF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach1g00181 146 CDD AP2 22 80 IPR001471 GO:0003700|GO:0006355
Bach1g00181 146 SMART rav1_2 23 87 IPR001471 GO:0003700|GO:0006355
Bach1g00181 146 Gene3D AP2/ERF domain 22 82 IPR036955 GO:0003700|GO:0006355
Bach1g00181 146 PRINTS Ethylene responsive element binding protein signature 24 35 IPR001471 GO:0003700|GO:0006355
Bach1g00181 146 PRINTS Ethylene responsive element binding protein signature 46 62 IPR001471 GO:0003700|GO:0006355
Bach1g00181 146 ProSiteProfiles CUT domain profile. 1 65 IPR003350 GO:0003677
Bach1g00181 146 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 21 106 - -
Bach1g00181 146 ProSiteProfiles AP2/ERF domain profile. 23 81 IPR001471 GO:0003700|GO:0006355
Bach1g00181 146 Pfam AP2 domain 22 64 IPR001471 GO:0003700|GO:0006355
Bach1g00181 146 SUPERFAMILY DNA-binding domain 22 82 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach1g00181 Bach-Chr1 2223232 2223672 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach1g00181 9 97 AP2-EREBP Transcription Factor Family AT1G12890 56.842 4.20e-29 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bach1g00181 AP2 1.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach1g00181 - - gmx:100816937 179.874